Phodopus roborovskii (desert hamster): 127235532
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Entry
127235532 CDS
T08852
Symbol
Usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127235532 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prob03041
]
127235532 (Usp39)
Spliceosome [BR:
prob03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
127235532 (Usp39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
127235532
NCBI-ProteinID:
XP_051058816
UniProt:
A0AAV0A1C8
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MSSRSKRQSHGSTRGKRESESRGSSGRIKKERDREREPEAAGSRGSPVRVKREAEPTARE
VPEPAPPAVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFE
KLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEI
IDSSLEDITYVLKPTFTKQQITNLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQ
ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ
AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP
HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK
FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR
EYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQM
ITLSEAYIQIWKRRDNDDTSQQGA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccggtccaagcggcagtctcacggttccacccgcggcaagcgcgagtccgag
tcgcggggtagctcgggtcgcatcaagaaggagcgagaccgggagcgggagccggaggcg
gcgggctcccggggcagcccggtccgcgtgaagcgggaagccgagccgacagcgcgagag
gtcccggagcccgcgccgccggccgtgagggtgaagcgggagcgcgaggccgacgaggac
tcggagcccgagcgggaggtgcgagcaaagaatggccgagtggactctgaggaccggagg
agtcgtcactgcccatacctggacaccattaacaggagtgtgctggacttcgactttgag
aaactctgttccatctccctctcgcatatcaatgcctacgcctgcctggtgtgtggcaag
tacttccaaggtcggggcttgaagtctcatgcttacatccacagcgtccagttcagccat
catgtcttcctcaacctccacactctcaagttttactgccttcctgacaactatgagatc
atcgattcctcgctggaggatatcacttacgtgttgaagcctactttcacaaagcagcaa
attacaaacttggacaagcaagccaaattgtcccgggcatatgatggtaccacatacctg
ccagggatcgtggggctgaacaacataaaagccaatgactacgcaaatgcagtgctacag
gctctgtcaaacgttcctcctcttcggaactacttcctggaggaagataattataagaac
atcaagcgccctccaggggacatcatgttcttgttggtccagcgttttggagagctgatg
agaaagctctggaacccccgaaacttcaaggcacatgtttctcctcatgagatgcttcag
gctgttgtcctttgcagcaagaagactttccagatcaccaaacaaggggatggagttgac
ttcctgtcttggtttctgaatgctctgcactcagctctgggtggcaccaagaagaagaag
aagactattgtgactgacgttttccaggggtcaatgagaatcttcaccaaaaagcttcct
catcctgatctgccagcggaagagaaagaacagctgctccataatgacgagtaccaagag
acgatggtagagtccacgtttatgtacctgaccctggacctccccactgccccactctat
aaggatgagaaggagcagctcattatcccgcaggtgccgctcttcaacatcctggccaag
ttcaacggcatcactgagaaggaatacaagacttacaaggagaacttcctgaagcgtttc
cagctcaccaaactgcctccgtatctcatcttctgcatcaagagattcactaagaacaac
ttcttcgttgagaagaatccgacaattgtcaacttccccatcacaaatgtggacctgaga
gagtacttgtctgaagaagtccaagcagtccacaagaacaccacttacgatctcatcgcc
aacatcgtgcatgatggcaagccctccgagggctcctacaggatccatgtgcttcaccac
ggaaccggcaagtggtacgaattgcaagacctccaggtgactgacatcctgccccagatg
atcaccttgtccgaggcgtacattcagatttggaagaggcgggataatgatgacaccagc
cagcagggggcttga
DBGET
integrated database retrieval system
