Phodopus roborovskii (desert hamster): 127235756
Help
Entry
127235756 CDS
T08852
Symbol
Shh
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04340
Hedgehog signaling pathway
prob04360
Axon guidance
prob05200
Pathways in cancer
prob05205
Proteoglycans in cancer
prob05217
Basal cell carcinoma
prob05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127235756 (Shh)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
127235756 (Shh)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127235756 (Shh)
05205 Proteoglycans in cancer
127235756 (Shh)
09162 Cancer: specific types
05226 Gastric cancer
127235756 (Shh)
05217 Basal cell carcinoma
127235756 (Shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prob01002
]
127235756 (Shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
prob00536
]
127235756 (Shh)
Peptidases and inhibitors [BR:
prob01002
]
Cysteine peptidases
Family C46: hedgehog family
127235756 (Shh)
Glycosaminoglycan binding proteins [BR:
prob00536
]
Heparan sulfate / Heparin
Morphogens
127235756 (Shh)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
127235756
NCBI-ProteinID:
XP_051059113
UniProt:
A0AAV0A3M0
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MLLLARCLLVVLASSLLVCPGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGV
KLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDQGRLLYSDFLT
FLDRDEGAKKVFYVIETREPRERLLLTAAHLLFVAPHNDTGAAGPAPGPSALFASRVRPG
QRVYVVAERGGDRRLLPAAVHSVTLREEAAGAYAPLTAHGTILINRVLASCYAVIEEHSW
AHRAFAPFRLAHALLAALAPARTDAGGGDSIPAPQPSAEARGSGPASGIHWYSQLLYQIG
TWLLDSETLHPLGMAVKSS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctagcgagatgtcttctggtggtcctcgcttcctcgctgctggtgtgcccc
gggctggcgtgcgggcccggtagggggtttggaaagaggcggcaccccaaaaagctgacc
cctttagcctacaagcagtttattcccaacgtagccgagaagaccctaggggccagcggc
agatatgaagggaagatcacaagaaactccgagcgatttaaggaactcacccccaattac
aaccccgacatcatatttaaggatgaggaaaacacgggagcagaccgactgatgactcag
aggtgcaaagacaagctaaatgccttggccatctctgtgatgaaccagtggccaggagtg
aagctccgagtgactgagggctgggatgaggatggccatcattcggaagagtctctacat
tacgagggccgagcagtggacatcaccacatctgaccgggaccgcagcaagtatggcatg
ctggctcgcctggctgtggaggctggcttcgactgggtctactatgaatccaaagcacac
atccactgctccgtgaaagcggagaactccgtggcggccaaatccgggggctgcttcccg
ggatccgccacagtgcacctggagcagggtggcaccaagctggtgaaggacctgcgtcca
ggagaccgcgtgttggctgctgacgaccagggccggctgctgtacagcgacttcctcacc
ttcctggaccgcgacgaaggtgccaagaaggtcttttacgtgatcgagacgcgggagccg
cgtgaacgcctgctgctcaccgccgcgcacctgctcttcgtggcgccgcacaatgacacg
ggagccgcggggcccgcaccaggaccgagcgcgctcttcgccagccgcgtgcgcccaggc
cagcgtgtgtacgtggtggccgaacgtggcggggaccgccggctgctgccagccgcggtg
catagcgtgacgctgcgtgaggaggcggctggcgcatatgcgccactcacggcgcacggc
accatcctcatcaaccgtgtgctagcctcgtgctacgccgtcatcgaggagcacagctgg
gcacaccgggccttcgcgcccttccgcttggcgcacgcgctcctggccgcgctggcgccc
gcccgcacggacgccgggggtggggacagcatccccgcaccccaaccctcagcggaggct
agaggctcagggccggcctcaggcatccactggtactcgcagctgctctaccaaattgga
acctggctgttggacagcgagaccttgcatcccttgggaatggcggtcaagtccagctga
DBGET
integrated database retrieval system