Phodopus roborovskii (desert hamster): 127235799
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Entry
127235799 CDS
T08852
Symbol
Smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03082
ATP-dependent chromatin remodeling
prob04714
Thermogenesis
prob05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127235799 (Smarcd3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
127235799 (Smarcd3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
127235799 (Smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prob03021
]
127235799 (Smarcd3)
03036 Chromosome and associated proteins [BR:
prob03036
]
127235799 (Smarcd3)
Transcription machinery [BR:
prob03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127235799 (Smarcd3)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127235799 (Smarcd3)
PBAF complex
127235799 (Smarcd3)
GBAF(ncBAF) complex
127235799 (Smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
127235799
NCBI-ProteinID:
XP_051059189
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MYLPTAQDPGDPTRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGLAPAGMEPARKRAA
PPPGQSQPQGQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLD
QTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIASWELRVEGKLLDD
VRPGPGLSRCPGPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVK
RPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHD
KEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDID
VEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYVQ
DLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSLVVR
NT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgcccacagcgcaggaccctggggaccccacgcgccccgggatgccgtctgga
gcccgaatgccccaccagggggcgcccatgggccccccgggctctccgtacatgggcagc
cccgccgtgcgacccggcctggcccccgcgggcatggagcccgcccgcaagcgagcagcg
cccccgcccgggcagagccagccacagggccagggccagcctgtgcccaccgcccccgcg
cggagccgcagtgccaagaggaggaagatggctgacaaaatcctccctcaaaggattcgg
gagctggtccctgagtcccaggcctacatggacctcctagcatttgagaggaaactggat
caaaccatcatgcggaagcgggtggacatccaggaggccctgaagaggcctatgaagcaa
aagcgaaagctgcgcctttatatctccaatacttttaaccctgcgaagcctgatgctgaa
gattctgatggcagcattgcctcctgggagctacgggtggaggggaagctcttggatgat
gtacgtcctggcccaggtctctccaggtgtcctgggcccagtaagcagaagcggaagttc
tcttccttcttcaagagtttggtcattgagttggacaaagacctttatggccccgacaac
caccttgttgagtggcaccggacacctacaacacaggagacagatgggttccaagtgaag
aggccaggggacttgagtgtacgctgcaccctgctccttatgctggactatcagcctccc
cagttcaaactggacccccgcttagcccggctgctggggttgcatacacagagccgctct
gccattgtccaagcactgtggcagtatgtgaagaccaaccggctgcaggactcccatgac
aaggaatacatcaatggagacaagtatttccagcagatttttgactgtccccgcttgaag
ttctctgagattccccagcgcctcacagccctgctgctgccccctgacccaattgtcatc
aaccatgtcatcagcgtggacccatcagaccagaagaagacagcgtgctatgacattgat
gtggaggtagaggagccactgaaggggcagatgagcagctttctcctgtccacagccaac
cagcaggagatcagtgctctggacagtaagatccatgagacgattgagtccataaaccag
ctcaagatccagagggacttcatgctaagtttctccagagacccaaaaggctacgtccaa
gacctgctccgctctcagagccgagacctcaaggtaatgacagatgtggctggtaaccct
gaagaggaacgccgggctgagttctaccaccagccctggtcccaagaagccgtcagccgc
tacttctactgtaagatccagcagcgcaggcaggagctggagcaatcgctggtcgtgcgc
aacacctag
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