Phodopus roborovskii (desert hamster): 127236006
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Entry
127236006 CDS
T08852
Symbol
Xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
127236006 (Xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prob03400
]
127236006 (Xpc)
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
127236006 (Xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Spore_III_AF
Motif
Other DBs
NCBI-GeneID:
127236006
NCBI-ProteinID:
XP_051059353
UniProt:
A0AAV0A3S8
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MAPKRPAGGRRRGRGQEAENNKAARPEESEADDFEDEKQKPSKKCFLSKVSQRKRKRGCS
HLRGPTKGPAKKKVAKATAKSETLKAPKEEALSTGDDFRDSPGDCKKSKKLPKIEVVAEG
SDEDEDSEDDWEEVEELTEPILDMGENPAPSQSVLPVKAVEIEIETPEQEKSRKRSEKIK
MELEMYLRRMMKRFNKEVQENMHKVHLLCLLASGFYRNSICRQPDLLAIGLSIIPTRFTK
VPLQDRDICFLSNLVKWFIGTFTVNEDLSASEQDSLQTTLERRIAIYSARDEEELVHIFL
LILRALQLLTRLVLSLQPIPLKSSVTKGKKSSKETSLESPRGSSEPSSQVPESHHRPKTS
KRMKQEETFSEDSDKANARGKRSKATGSKQKRKPSCGEGEETKPKTQSRAHAKRRVAAKV
SYKEESGSDEEGSGSDFELSSSESQHFSDEDHEPSPRKQKRIPVPQRTKARSKSASKTQH
KPPSFPAASSSSSGSKGGKKVSSRGEEIGDRNAAGADQWLEVFCEPQAKWVCVDCVHGVV
AQPLTCYKYATKPMTYVVGIDNDGWVRDVTQRYDPAWMTATRKSRVDAEWWAETLRPYQS
PLKEREKKEDLEFQAKHLDQPLPTSISTYKNHPLYALKRHLLKFQAIYPETAAVLGYCRG
EAVYSRDCVHTLHSRDTWLKQARVVRLGEAPYKMVKGFSNRARKARLSEPQLHDYNDLAL
YGHWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPIGCVQMNLPNLHRVARKLGIDCVQ
AITGFDFHGGYCHPVTDGYIVCEEFKDVLLAAWENEQAIIEKKEKEKKEKRALGNWKLLV
RGLLIRERLQLRYGAKSEAVAPHANAGGGLSSDEEEGTSSQAEAARVLAASWPQNREAKE
EEKPEYSKMTRKRRAAEASHLFPFEKL
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggctccaaagcgccctgcaggtggaaggcggcgggggcgcggccaagaagccgagaac
aacaaagcagcccggcctgaggagagcgaggcggatgactttgaagatgaaaaacagaaa
ccatcaaagaagtgctttctctccaaagtttcacaaagaaaaaggaagagaggctgcagt
catctaagaggccccacaaagggtccagcaaaaaagaaagtggccaaagccactgctaaa
tctgagactctcaaggctccgaaggaggaagccctcagcactggggatgatttcagggac
tctccaggtgactgcaagaagtcaaagaagcttccaaagatagaggtggtggctgaaggc
agtgatgaagatgaggacagtgaggatgactgggaggaggtggaagaacttactgagcct
atcctggacatgggagaaaatcctgccccttcacagtctgtccttcctgtaaaggcagtg
gagatagaaattgaaacaccggagcaggagaagtcacggaagagaagtgagaagataaag
atggagcttgagatgtatctgcggaggatgatgaagcgcttcaataaggaagttcaggag
aacatgcacaaggttcacctgttgtgcctactggccagtggcttctatcgaaatagcatc
tgccgccagccagatctgttggccattggcctctccatcatcccaactcgctttaccaag
gtgccacttcaagacagggacatctgcttcctctcaaacctggtgaagtggttcattgga
accttcacagtcaatgaggacctttcagcaagtgagcaggacagcctgcagacaaccttg
gagaggagaatcgccatttactctgcgagggatgaggaggagttggttcatatatttctt
ctgattcttcgggccctgcagctgctcacccgactggtgttgtctctacagcccattcca
ctgaagtcatctgtaacaaaggggaagaaatcttccaaggagacatccttagagagccct
agaggttcttcagaaccttccagtcaagttccagaaagccaccacagacccaagaccagc
aaaagaatgaaacaagaggaaaccttttctgaggacagtgacaaggcaaatgccagaggg
aagagaagcaaggctacaggcagcaagcagaagagaaagccctcctgtggtgagggagag
gaaaccaagccaaaaacccagagccgtgcacacgccaagcggcgggtggctgccaaggtg
tcttacaaagaggagagcggcagcgatgaggaaggcagtggctctgattttgaactctcc
agcagtgaaagccagcatttctctgacgaggatcatgagcccagccctcgaaagcagaag
aggatcccagttcctcagaggacaaaggccaggtccaagagtgcctccaagacccagcat
aagccaccaagctttccagcagcatcctcaagctcttcaggcagtaagggaggcaagaag
gtttccagtcgtggtgaagagataggagatagaaatgctgctggtgctgaccagtggctg
gaggtgttctgtgagccacaggcaaagtgggtgtgtgtggactgtgtgcatggtgtggtg
gcccagcctctgacctgttacaaatatgccaccaaacccatgacctatgttgtaggcatt
gacaatgatggctgggtccgagatgtcactcagaggtatgacccagcctggatgacagca
acccgcaaaagccgggttgatgctgaatggtgggctgagaccttgagaccctatcagagc
ccacttaaggagagggagaagaaggaagacctggagtttcaggcgaagcacctggaccag
cctttgcctacctccatcagcacatacaagaaccaccctctctatgccctgaagcgccac
ctcttgaaattccaggccatctaccctgagacagctgcagtccttgggtattgtcgggga
gaagctgtctactccagggattgtgtgcatactctgcactccagggacacatggctgaag
caagcaagagtggtgcggcttggagaagcaccctacaagatggtgaaaggcttctccaac
cgcgcccggaaagcccggctttcggagccccagctgcatgactacaatgacttggccctc
tatggtcactggcagacagaagagtatcagccccctgtggccgtagatgggaaggtacct
cggaatgagtttgggaacgtgtatctcttcctgcccagcatgatgcctatcggctgtgtc
cagatgaacctgcccaacctgcaccgtgtggcccgcaagctgggcatcgactgtgtgcag
gccatcactggcttcgatttccatggaggctactgccatccagtaactgatggttacatt
gtctgtgaggaattcaaagatgtgctgctggctgcttgggagaatgaacaagccatcatt
gaaaagaaggagaaggagaaaaaggagaagcgggcactggggaattggaagctactggtc
agaggactactcatcagagagaggctgcaactgcgatatggggccaagagtgaggcagta
gctccccatgcaaatgcaggaggtggactctcttctgatgaagaggaagggaccagctca
caagcagaagcagcaagagtcctggctgcctcctggccgcaaaaccgagaagctaaggaa
gaggagaagcctgagtactctaagatgacccgcaagaggcgggccgcagaggcctcccat
ctcttcccatttgagaagctgtga
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