Phodopus roborovskii (desert hamster): 127236249
Help
Entry
127236249 CDS
T08852
Symbol
Erc1
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04064
NF-kappa B signaling pathway
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
127236249 (Erc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127236249 (Erc1)
Membrane trafficking [BR:
prob04131
]
Exocytosis
Others
Others
127236249 (Erc1)
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
127236249 (Erc1)
BRITE hierarchy
Motif
Pfam:
Cast
RBD-FIP
ATG16
AAA_13
GAS
ADIP
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
127236249
NCBI-ProteinID:
XP_051059785
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MYGSARSVGKVEPSSQSPGRSPRLPRSPRLGHRRTNSTGGSSGNSVGGGSGKTLSMENIQ
SLNAAYATSGPMYLSDHENVGSETPKSTMTLGRSGGRLPYGVRMTAMGSSPNIASSGVAS
DTIAFGEHHLPPVSMASTVPHSLRQARDNTIMDLQTQLKEVLRENDLLRKDVEVKESKLS
SSMNSIKTFWSPELKKERALRKDEASKITIWKEQYRVVQEENQHMQMTIQALQDELRIQR
DLNQLFQQDSSSRTGEPCVAELTEENFQRLHTEHERQAKELFLLRKTLEEMELRIETQKQ
TLSARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENNML
REEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEERE
EEMKQMEVYRSHSKFMKNKVEQLKEELSSKEAQGEELKKRAAGLQSEIGQVKQELSRKDT
ELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNK
KTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKER
VKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLKEK
VSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKA
HEATLEARASPEMSDRIQQLEREIARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA
ELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIE
ELEEALRESVQITAEREMVLAQEESARTSAEKQVEELLMAMEKVKQELESMKAKLSSTQQ
SLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKTQEEVAA
LKREKDRLVQQLKQQTQNRMKLMADNYEDDHFKSSRSNQTNHKPSPDQIIQPLLELDQNR
SKLKLYIGHLTALCHDRDPLILRGLTPPASYNADDDQAAWENELQKMTQEQLQSELEKVE
GDNAELQEFANTILQQIADHCPDILEQVVNALEESS
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaagtgctcgatcagtagggaaagtggaaccaagcagccagagtcctgggcga
tcacctcggcttccacggtcccctcgcttaggtcataggcgaacaaatagtacaggaggg
agttctggaaacagtgttggaggtggcagtgggaaaaccctttcaatggagaacatacag
tccttaaatgctgcctatgctacatctggccctatgtacctaagtgaccatgaaaacgtg
ggttcagaaacacctaaaagcaccatgacacttggccgttctggggggcgcctgccgtat
ggtgttaggatgactgctatgggcagtagccccaatatagcaagcagtggggttgctagc
gataccatagcatttggagaacatcacctccctcctgttagtatggcatccactgtacct
cactctcttcgtcaggcaagagataacaccatcatggatctgcagacacagctaaaggaa
gtattaagagaaaatgatctcttgaggaaggatgtggaagtaaaggaaagcaaattaagt
tcttcgatgaatagcatcaagaccttttggagcccagagctgaagaaagagcgagccttg
agaaaagacgaagcttccaaaatcaccatttggaaggagcagtaccgagttgtgcaggaa
gaaaaccagcacatgcagatgacaatccaggctctccaggatgagctgcggattcagagg
gacctgaaccagctgtttcagcaagacagcagcagtaggactggagagccttgtgtggca
gagctgacagaggagaacttccagaggctgcacaccgagcatgagcggcaagccaaagag
ctgttcctcttgcggaagaccctggaggaaatggagttgcgaattgaaacgcagaagcaa
accctaagtgctcgggatgagtccattaagaagcttctggagatgttgcagagcaaaggg
ctttctgctaaagccacggaggaagaccacgaaaggacaaggcggctggcagaggcagag
atgcacgttcatcacctagaaagccttctggagcaaaaggaaaaagagaataatatgttg
cgagaggagatgcatcggagatttgagaatgcccctgattctgccaaaacaaaagcctta
caaactgtcattgagatgaaggattctaaaatttcttccatggagcgtggactccgagac
ctggaagaggaaattcagatgctgaaatcaaatggggctttgagtactgaagagcgggag
gaggagatgaaacaaatggaggtgtataggagccactccaaattcatgaaaaataaggta
gagcaactgaaggaggaactaagttcgaaagaggctcaaggggaggagctgaaaaagaga
gctgctggtcttcagtctgagattggccaggtgaaacaagagttgtccagaaaggacact
gaactgctagccttacagacaaagctagaaactctcacgaaccagttctcagacagtaag
caacatattgaggtgctgaaggagtccctcacggctaaggaacaaagggctgccatcctg
cagactgaggtggatgctcttcgattgcgtttggaagaaaaggagacaatgctgaataaa
aaaaccaaacaaattcaagatatggctgaggagaaaggtacacaagctggagagatacac
gaccttaaggacatgctggacgtgaaggagcggaaggtcaatgttcttcagaagaagatt
gagaatctccaggaacagctgagagataaagagaagcagatgagcagcttgaaagagcga
gtcaaatccctgcaggcagacaccaccaacacagacacagcgctcaccaccctggaggag
gctcttgcagagaaagaacggacaattgaacgcttaaaggagcagcgggacagagatgag
cgagagaagcaagaggagattgatacctacaaaaaagatcttaaagacttgaaagaaaaa
gtcagcctgttgcaaggagacctctcagagaaggaggcttctctcttagatctcaaagag
catgcttcttcgttggcttcctcgggactgaaaaaggactcacgactgaagaccctagag
attgctcttgagcagaagaaggaagagtgcctgaaaatggagtcacagctgaagaaggca
catgaagcaacattggaagccagagccagtccagaaatgagtgaccgaatacagcagttg
gagagagagattgccaggtacaaagatgaatccagcaaggcccagacagaagttgaccgc
ctcttggaaatcttgaaagaagtggaaaatgagaagaatgacaaagataagaagatagct
gagttagagaggcaagtcaaagaccagaataagaaggtagcaaatctgaagcacaaggag
caggtggagaagaagaagagtgcacagatgctagaggaggcccggagaagggaggacagt
ctcagcgacagttcccagcaactgcaggacagtctccgtaagaaggatgacaggattgaa
gagctggaagaagcactgagagagagtgtacagataactgcagagcgtgaaatggtgctg
gcacaagaggagtcagccaggaccagtgctgagaaacaggtggaagagctgttgatggcc
atggagaaggtgaagcaggaactggagtccatgaaagctaagctgtcctccactcagcag
tccttggcagagaaagagacacatctcaccaatctccgggcagagagaaggaagcaccta
gaggaagttctggagatgaagcaagaagctcttctggctgctattagtgaaaaggatgct
aatatagctcttctcgagctttcctcctctaagaaaaagacccaagaagaagtggctgca
ttgaaacgggaaaaggaccgcctggtgcagcaactcaaacaacagacacaaaatcgaatg
aaactaatggctgacaactatgaggatgaccacttcaaatcctcccgttccaatcagacg
aaccataaaccctccccagaccagatcatccagcccctcttagaacttgaccaaaataga
agcaagttaaagttgtatattggacacctgacagccctctgccatgaccgagacccctta
atccttcgtggactcactccaccagcttcttataatgcagatgatgaccaggcagcttgg
gagaatgagctgcagaagatgacccaggagcagcttcagagtgagctggagaaagtcgaa
ggggacaatgcagagctgcaggagttcgccaacaccattcttcagcagatagctgatcac
tgccctgacatccttgagcaagttgtcaatgccctggaagagtcctcctga
DBGET
integrated database retrieval system
