Phodopus roborovskii (desert hamster): 127236379
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Entry
127236379 CDS
T08852
Symbol
Sox13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127236379 (Sox13)
Transcription factors [BR:
prob03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127236379 (Sox13)
BRITE hierarchy
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
127236379
NCBI-ProteinID:
XP_051059960
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MSMRSPVSVQLAPDSGSTMVNCTIKSEEKEPHHEAPQDKAAAVETQPEDLALGLQDAAGS
QAPAQDCASPESSGSPDPKRPAASEAASGSQERLDFNRNLQEVVPAIEKLLSSDWKERLL
GRSSVETKDVKGTQESLAEKELQLLVMIHQLSALRDQLLTAHSEQKNMAAMLFEKQQQQM
ELARQQQEQIAKQQQQLIQQQHKINALQQQIQQVNMPYVMIPAFPPSHQPLPVTPDSQLA
LPIQPIPCKPVEYPLQLLHSPPAPVVKRPGVATHHPLQEPPQPLNLTAKPKVPELPNTSS
SPNLKMNSCGPRPSSRGAPTRDLQSSPPSLPLGFLGEGDAVTKAIQDARQLLHSHSGNLE
NSPNPPFRKDLISLESSPAKERLEESCVHPLEEAMLSCDMDGARHFSESRNSSHIKRPMN
AFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYP
DYKYKPRPKRTCVVEGRRLRVGEYKALMRTRRQGARQSYTIPPQAGQAVSSSDVLFPRAA
GMPLAQPLVEHYVPQGLDPRMPVIINTCSLREEGEGTDDRHSVADGDMDRYSEDEDSEGE
EKSDGELVVLTD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgcggagccctgtctctgtgcagctggccccggacagtggtagcaccatggtg
aactgcaccatcaaatctgaagagaaggaacctcaccacgaggccccccaggacaaggct
gctgcagtggagacccagcctgaagacctagctctggggctgcaggatgctgccggttcc
caagctccagctcaggactgtgcctcaccagagagcagcgggtccccagaccccaagaga
ccagcagcttctgaggctgcttcgggaagccaggagcggctggactttaaccgcaactta
caagaagttgtgccagccattgagaagctgctgtccagtgactggaaggagcggcttctg
ggaagaagctctgtggaaaccaaagatgtcaaagggacccaagagagcctggctgagaag
gagctccagcttctggtcatgatccaccagctgtccgcccttcgtgaccagctcctcacg
gcccactctgagcaaaagaacatggctgccatgctgtttgagaaacaacagcagcagatg
gaactcgcccggcagcagcaggagcagatcgccaagcagcagcagcagctgattcaacag
cagcacaagatcaatgccctccagcagcagatccagcaggttaacatgccttatgtgatg
atcccagcctttcccccgagtcaccagcctctgcctgtcacccctgactcccaactggct
ttgccgattcagcccatcccctgcaagccagtggagtacccgctgcagctgctacacagc
cctcctgcccctgtggtgaaaaggcctggggtggccacccaccaccctctgcaggaacca
ccccagccattgaacctcacagccaagcccaaggtgcctgagctgcccaacacctccagc
tcccccaacctgaaaatgaacagctgtgggcctcgtccctccagccgcggggctcccaca
agggacctgcagtccagccccccaagcctgcctctgggcttccttggcgaaggggatgct
gtcaccaaagctatccaggacgctcgccagctgctgcacagccacagtgggaatttggaa
aactcccctaaccctccattccgaaaggatctcatcagcctggaatcatccccagccaag
gagcggctggaggagagctgtgtacacccactggaggaagccatgctgagctgcgacatg
gatggcgcccgccatttctccgagtcccggaatagcagccacatcaagagacccatgaat
gccttcatggtgtgggccaaggatgagcggagaaaaattctccaggccttcccagacatg
cacaactccagcatcagcaagattcttggctctcgctggaagtccatgacaaaccaggag
aagcagccgtactatgaggagcaggcccgtctgagccgccagcacctggagaaatacccc
gactacaagtacaagccacggcctaagcgtacctgcgttgtggagggaaggcggctgcgc
gtgggcgagtacaaggccctgatgaggacacggcgccagggtgctcgccagagctacacc
atccccccgcaggctggccaggcagtgagctcctcagatgtcctgttccctcgggcagcc
ggcatgcccctggcgcaaccattggtggagcactatgtccctcagggcctggaccccagg
atgccggtcattatcaatacatgcagcctccgggaggaaggggagggcaccgatgacagg
cactcagtggctgatggagacatggaccggtacagcgaggacgaggactcggagggcgag
gagaagagtgatggggagttggtggtactcacagactga
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integrated database retrieval system
