KEGG   Phodopus roborovskii (desert hamster): 127236485
Entry
127236485         CDS       T08852                                 
Symbol
Nfasc
Name
(RefSeq) neurofascin
  KO
K06757  neurofascin
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:prob00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127236485 (Nfasc)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:prob04515]
    127236485 (Nfasc)
Cell adhesion molecules [BR:prob04515]
 Immunoglobulin superfamily
  L1 family
   127236485 (Nfasc)
SSDB
Motif
Pfam: Ig_3 I-set fn3 Ig_2 ig Bravo_FIGEY V-set Ig_DSCAM-DSCAML_C Ig_5 C2-set_2 V-set_CD47 Ig_VEGFR-1-like_5th BiPBP_C DUF4998
Other DBs
NCBI-GeneID: 127236485
NCBI-ProteinID: XP_051060137
LinkDB
Position
Unknown
AA seq 1335 aa
MDRQQAPPWVHTALILFLLSLGGAIEIPMDLTQPPTITKQSVKDHIVDPRDNILIECEAK
GNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGT
ALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQD
KRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSF
MYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKTKFENFNKALRITNV
SEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKP
TVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL
DVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSL
EIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVVKRGTTVQLECRVK
HDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAY
LTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVIQFE
EDQFQPGVWHDHSKFPGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAP
PESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNVTVWGSRY
VVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRVMNSTAISLQW
NRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKL
EMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYT
LKYVAFNGTKLGKQMVENFSPNQTKFSVQRADPVSRYRFSLSARTQVGSGEAATEESPAP
PNEATPTAAPPTLPPTTVGTTGLVSSIDAPTSEATTVPIIPTAVPTTIATTIATTTTTTA
AATTTTESPPTTTIGTKIQETAPDEQSIWNVTVLPNSKWANITWKHNFRPGTDFVVEYID
SNHTKKTVPVKAQAQPIQLTDLYPGMTYTLRVYSRDNEGISSTVITFMTSTAYTNNQADI
ATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEDDGSFDYSD
EDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNE
SSEATSPVNAIYSLA
NT seq 4008 nt   +upstreamnt  +downstreamnt
atggacaggcagcaggcgccaccctgggtccacacagccctcatcctcttcctcctcagc
ctcggaggggccattgagattccaatggacctgacccagcccccaactatcaccaagcag
tcggtgaaggaccacatcgtggacccccgtgataacatcctgattgaatgtgaagctaaa
gggaaccctgcccccagttttcactggactcggaacagcagattcttcaacattgccaag
gacccgcgcgtgtccatgaggaggaggtctgggaccttggtgattgatttccgaagtggt
ggacgacctgaggaatatgaaggggaataccagtgcttcgcccgaaacaaatttggcacc
gcgcttagcaaccgcatccgcctgcaggtgtccaaatctcccctgtggcccaaggaaaac
ctagaccccgtcgtggtccaagagggtgcccccttgacactgcagtgcaatccccctcct
ggcctcccatctccagtcatcttctggatgagcagctccatggagcccatcactcaggac
aagcgtgtctcccagggtcataatggggacctatacttctccaacgtcatgctgcaggac
atgcagaccgactacagctgcaatgcacggttccacttcacccacaccatccagcagaag
aacccgttcaccctcaaggtccttaccacccgaggagttgctgaaagaacgcctagcttc
atgtatccccagggcacctcgagcagtcagatggtactccgtggcatggacctgttgctg
gagtgcattgcctctggggtcccaacaccagacattgcatggtacaagaaaggtggggac
ctcccgtctgacaagaccaagtttgagaactttaacaaggctctgcgcatcaccaatgtc
tctgaagaagactctggggagtatttctgcctggcctccaacaagatgggcagcatccgg
cacacgatctcggtgagagtaaaggctgctccatactggctggacgaacccaaaaacctg
atcctggctcctggtgaagatgggaggctggtatgccgagccaatgggaacccgaagcca
actgtccagtggatggtgaacggagagcctttgcaatccgcaccaccgaaccccaaccgt
gaggtggctggagatactatcatcttccgggacactcagatcagcagcagggcggtgtac
cagtgtaacacatccaacgagcatggctacctgctggccaatgccttcgtcagtgtgctg
gatgtgccccctcggatgctgtctccccggaaccagctcatcagggtgatcctttacaat
cggacacggctggactgtccattcttcggctctcccattccaacactccgatggtttaag
aatgggcaagggagcaacctggatggtggaaactaccacgtctacgaaaacggcagtctg
gaaatcaagatgatccgcaaagaggaccaaggcatctacacctgtgtggccaccaacatc
ctgggcaaagctgagaatcaagtccgcctagaggtcaaagaccccaccaggatctacagg
atgcccgaggaccaggtggtgaagaggggcactacggtgcagttggagtgtcgcgtgaag
catgacccgtccctgaagctcacggtctcctggctgaaggacgatgagccgctgtacatt
ggaaacaggatgaagaaggaagatgactccctgaccatctttggcgtggcagagcgggac
caaggcagttacacgtgcatggccagcaccgagctggaccaagacctggccaaggcctac
ctcactgttctagctgatcaggccactccaactaaccgtttggctgccctgcccaaagga
cggccagaccgacccagggacctggaactcactgacctggctgagaggagtgtgaggctg
acctggattccaggggatgataacaacagccccatcacagactacgtcatccagtttgaa
gaggaccagttccaaccaggggtctggcatgaccactccaagttcccaggcagtgtcaac
tcagccgtgctccatctgtccccgtatgtcaactaccagttccgagtcatcgccgtcaac
gaggtcgggagcagccaccccagccttccgtctgagcgctacagaaccagtggcgcaccc
cccgagtccaaccccagtgacgtgaagggagaggggacaagaaagaacaatatggagatc
acgtggacgcccatgaatgctacctctgcttttggccccaacctgcgctacattgtcaag
tggcgacggagggagacccgagagacttggaacaacgtcacagtgtggggctctcgctat
gtggtgggacagacccctgtctacgtaccctatgagatccgagtccaggctgaaaacgac
tttgggaagggtcccgagcctgacaccatcattgggtactcaggagaagattatcccaga
gctgcacccactgaagttaaaatccgagtcatgaacagcacagccatcagccttcagtgg
aaccgggtctactctgacacggtccaaggccagctcagagaatatcgagcttactactgg
agggaaagcagcttgctgaagaacctgtgggtgtctcagaagagacagcaggccagcttc
cctggtgaccgccccaggggcgtggtggctcgcctgttcccctacagtaactacaagctg
gagatggttgtggtcaatgggagaggtgatggacctcgcagtgaaaccaaggaattcacc
accccggaaggagtacccagtgcccccaggcgattcagagtccgacagcccaacctggag
accatcaacctggagtgggaccatccggagcaccctaatggaatcctgatcggatacact
ctcaaatacgtggcctttaatggaaccaaactgggaaagcagatggtggaaaacttctct
cccaatcagacgaagttctccgtgcagagagcggaccctgtatcgcgctatcgtttctcc
ctcagtgccaggacgcaggtgggctctggagaagcagccacagaggagtccccagcacct
ccaaatgaagctactccaactgcagctcctcccacgttacccccaaccactgtgggtacc
acaggccttgtgagcagtattgatgctcccaccagtgaagcaacaacagtccccatcatc
ccaaccgccgtacctaccaccatcgccaccaccatcgccacaactactacaaccactgcc
gccgccaccaccaccacggagagtcctcccactaccaccattgggactaagattcaggaa
accgcccccgatgagcagtccatttggaacgtcacggtgctccccaacagtaaatgggcc
aacatcacctggaagcacaatttcaggcctggaactgactttgtggttgagtacatcgac
agcaaccatacgaaaaaaactgtccctgttaaggcccaggcccagcctatacagctgaca
gacctctatcccgggatgacgtacacgttgcgggtgtattcccgggacaacgagggcatc
agcagtaccgtcatcacctttatgacaagtacagcttacaccaataaccaggcagacatc
gccacccagggctggttcatcgggctcatgtgcgccattgcccttctggtgctgatcctg
ctcatcgtctgcttcatcaagaggagccgaggtggcaagtacccagttcgagaaaagaag
gacgtccctctgggcccggaagaccccaaagaagatgacggttcatttgactacagtgat
gaggacaacaagcccctgcaaggcagccagacatctctggatggcaccatcaaacagcag
gagagtgatgacagcctggtggactatggcgaaggtggcgagggccagttcaatgaagac
ggctcctttatcggccagtacacagtcaaaaaggacaaggaggaaacagagggcaatgag
agctcggaggctacgtcacctgtcaatgccatctattccctggcctga

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