Phodopus roborovskii (desert hamster): 127236587
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Entry
127236587 CDS
T08852
Symbol
Srf
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04010
MAPK signaling pathway
prob04022
cGMP-PKG signaling pathway
prob05166
Human T-cell leukemia virus 1 infection
prob05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127236587 (Srf)
04022 cGMP-PKG signaling pathway
127236587 (Srf)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
127236587 (Srf)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
127236587 (Srf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127236587 (Srf)
Transcription factors [BR:
prob03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
127236587 (Srf)
BRITE hierarchy
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
127236587
NCBI-ProteinID:
XP_051060254
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MLPSQAGAAAALGRGSALGGSLNRTPTGRPGGGGGTRGANGGRVPGNGTGLGPGRLEREA
AAAAAPTPAPTAGALYSGSEGDSESGEEEELGAERRGLKRSLSEMELGVVVGGPEAAAAA
AGGYGPVSGAVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTG
TQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATG
FEEPDLTYQVSESDSSGETKDTLKPAFTVTNLPGTTSTIQTAPSTSTTMQVSSGPSFPIT
NYLAPVSASVSPSAVSSANGTVLKSTGSGPVPSGGLMPLPASFTLMPGGAVAQQVPVQAI
QVHQAPQQASPSRDSSTDLTQTSSSGTVTLPATIMTSSIPTTVGGHMMYPSPHAVMYAPT
SGLADGSLTVLNAFSQAPSTMQVSHSQVQEQGGVPQVFLTAPSGTVQIPVSAVQLHQMAV
IGQQAGSSSNLTELQVVNLDATHSTKSE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccaagctggggccgcggcggctctgggccggggctcggccctggggggc
agcctgaaccggaccccgacggggcggccgggcggcggcggcggcactcgcggggcgaac
ggtggccgggttcccgggaacggcacggggctcggcccgggccgtctggagcgggaggct
gcagcggctgcggcgcccaccccggcgcccaccgccggggccctctacagcggcagcgag
ggcgactcagagtccggcgaggaggaggagctgggcgccgagcggcgcggcctcaagcgg
agcctgagcgagatggagctcggcgtggtggtcggtgggcccgaggcggcggcggcagcc
gccgggggctacgggccggtgagcggtgcggtgagcggggccaagccggggaagaagacc
cggggccgcgtgaagatcaagatggagttcatcgacaacaagctgcggcgctacacgacc
ttcagcaagaggaagacgggcatcatgaagaaggcctatgagctgtccacgctgacaggg
acacaggtgctgttgctggtggccagtgagacaggccatgtgtatacctttgctacccgc
aaactgcagcccatgatcaccagtgagaccggcaaggcactgattcagacctgcctcaac
tcgccagactctccaccccgctcagaccccaccacagaccagagaatgagtgccactggc
tttgaagagccggacctcacctaccaggtgtcggaatctgacagcagtggggaaaccaag
gacacactgaagccagcgttcacagtcaccaacctgccgggtaccacctccaccatccag
acagcacccagcacctctaccaccatgcaagtcagcagcggcccctccttccccatcacc
aactacctggcgccggtgtctgctagcgtgagccccagtgccgtgagcagtgccaatggg
actgtgctcaagagcacaggcagtggccctgtcccctccgggggccttatgccgctgcct
gccagcttcaccctcatgcctggtggggcagtggcccagcaggtccctgtgcaggccatt
caggtgcaccaggccccacaacaagcgtctccctctcgtgacagcagcacggacctcacg
cagacctcctccagtgggacagtgacgttgcccgccaccatcatgacgtcgtctataccc
acaactgtgggtggccacatgatgtaccctagtccccatgcagtgatgtatgcccccacc
tcgggcctggctgatggcagcctcaccgtgctcaatgccttctcccaggcaccatccacc
atgcaggtgtcccacagccaggtccaggagcaaggtggtgtccctcaggtgttcctgaca
gcgccctctgggactgtgcagattcccgtgtctgctgtccagcttcatcagatggctgta
atagggcagcaagctgggagcagcagcaacctcaccgagctacaggtggtgaacttggac
gccacccacagcaccaagagtgaatga
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integrated database retrieval system