KEGG   Phodopus roborovskii (desert hamster): 127236587
Entry
127236587         CDS       T08852                                 
Symbol
Srf
Name
(RefSeq) serum response factor isoform X1
  KO
K04378  serum response factor
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob04010  MAPK signaling pathway
prob04022  cGMP-PKG signaling pathway
prob05166  Human T-cell leukemia virus 1 infection
prob05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:prob00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    127236587 (Srf)
   04022 cGMP-PKG signaling pathway
    127236587 (Srf)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    127236587 (Srf)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    127236587 (Srf)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:prob03000]
    127236587 (Srf)
Transcription factors [BR:prob03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box responders to external signals
    127236587 (Srf)
Motif
Pfam: SRF-TF
Other DBs
NCBI-GeneID: 127236587
NCBI-ProteinID: XP_051060254
LinkDB
Position
Unknown
AA seq 508 aa
MLPSQAGAAAALGRGSALGGSLNRTPTGRPGGGGGTRGANGGRVPGNGTGLGPGRLEREA
AAAAAPTPAPTAGALYSGSEGDSESGEEEELGAERRGLKRSLSEMELGVVVGGPEAAAAA
AGGYGPVSGAVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTG
TQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATG
FEEPDLTYQVSESDSSGETKDTLKPAFTVTNLPGTTSTIQTAPSTSTTMQVSSGPSFPIT
NYLAPVSASVSPSAVSSANGTVLKSTGSGPVPSGGLMPLPASFTLMPGGAVAQQVPVQAI
QVHQAPQQASPSRDSSTDLTQTSSSGTVTLPATIMTSSIPTTVGGHMMYPSPHAVMYAPT
SGLADGSLTVLNAFSQAPSTMQVSHSQVQEQGGVPQVFLTAPSGTVQIPVSAVQLHQMAV
IGQQAGSSSNLTELQVVNLDATHSTKSE
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgttaccgagccaagctggggccgcggcggctctgggccggggctcggccctggggggc
agcctgaaccggaccccgacggggcggccgggcggcggcggcggcactcgcggggcgaac
ggtggccgggttcccgggaacggcacggggctcggcccgggccgtctggagcgggaggct
gcagcggctgcggcgcccaccccggcgcccaccgccggggccctctacagcggcagcgag
ggcgactcagagtccggcgaggaggaggagctgggcgccgagcggcgcggcctcaagcgg
agcctgagcgagatggagctcggcgtggtggtcggtgggcccgaggcggcggcggcagcc
gccgggggctacgggccggtgagcggtgcggtgagcggggccaagccggggaagaagacc
cggggccgcgtgaagatcaagatggagttcatcgacaacaagctgcggcgctacacgacc
ttcagcaagaggaagacgggcatcatgaagaaggcctatgagctgtccacgctgacaggg
acacaggtgctgttgctggtggccagtgagacaggccatgtgtatacctttgctacccgc
aaactgcagcccatgatcaccagtgagaccggcaaggcactgattcagacctgcctcaac
tcgccagactctccaccccgctcagaccccaccacagaccagagaatgagtgccactggc
tttgaagagccggacctcacctaccaggtgtcggaatctgacagcagtggggaaaccaag
gacacactgaagccagcgttcacagtcaccaacctgccgggtaccacctccaccatccag
acagcacccagcacctctaccaccatgcaagtcagcagcggcccctccttccccatcacc
aactacctggcgccggtgtctgctagcgtgagccccagtgccgtgagcagtgccaatggg
actgtgctcaagagcacaggcagtggccctgtcccctccgggggccttatgccgctgcct
gccagcttcaccctcatgcctggtggggcagtggcccagcaggtccctgtgcaggccatt
caggtgcaccaggccccacaacaagcgtctccctctcgtgacagcagcacggacctcacg
cagacctcctccagtgggacagtgacgttgcccgccaccatcatgacgtcgtctataccc
acaactgtgggtggccacatgatgtaccctagtccccatgcagtgatgtatgcccccacc
tcgggcctggctgatggcagcctcaccgtgctcaatgccttctcccaggcaccatccacc
atgcaggtgtcccacagccaggtccaggagcaaggtggtgtccctcaggtgttcctgaca
gcgccctctgggactgtgcagattcccgtgtctgctgtccagcttcatcagatggctgta
atagggcagcaagctgggagcagcagcaacctcaccgagctacaggtggtgaacttggac
gccacccacagcaccaagagtgaatga

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