Phodopus roborovskii (desert hamster): 127237014
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Entry
127237014 CDS
T08852
Symbol
Sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prob03036
]
127237014 (Sbno1)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127237014 (Sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
127237014
NCBI-ProteinID:
XP_051060991
UniProt:
A0AAV0A751
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDVDGGDAGLATPTAPSVQQSMPLSALELGLETEAVV
PVKQEPETMSTPALLNVRQQPPSTTTFVLNQINQLPTLGSTIVMTKTPPATTNRQTITLT
KFIQTTANTRPSVSAPAVRNPMPPAPSKDQVQLKDLLKNSSLNELMKLKPPANIAQPVAT
AATDVSNGAVKKESSNKEVARIWINDMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAET
YAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAVTYA
AQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAER
DLKDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQL
LHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASE
PRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGV
TFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFF
KYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVL
QSLIEKHFPAPDRKKLYSLLGIDLTAPSNNSSPRDSPCKENKIKKRKGEEITREAKKARK
VGGLTGSSSDDSGSESDVSDNEESDYESSKNMSSGDDDDFNPFRDESSEDNEDDPWLIRK
EHKKSKDKKKKKSIDPDSIQSALLASGLGSKRPSFSSAPVISPAPNSAPANSNTNSNSSL
ITSQDAVERAQQMKKDLLDKLDKLAEDLPPNTLDELIDDLGGPENVAEMTGRKGRVVSND
DGSISYESRTEIDVPVEILNITEKQRFMDGKKNIAIISEAASSGISLQADRRAQNQRRRV
HMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTH
GDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLIG
VGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNGR
YDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTGP
DDGFYLSLQIRNNKKTAILVKEVNPKKKLFLIYRPNTGKQLKLEIYADLKKKYKKVVSDD
ALVHWLDQYNSSADTCTHAYWRGNCKKASLGLICEIGLRCRTYYVLCGSVLSVWTKVEGV
LASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQKQLWQQ
HHPQSITNLSNT
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaccaggtcaagatttactgcttgctgccttgagcgagagtgggattagtccg
aatgacctctttgatgttgatggtggagatgccgggcttgcaactcctactgccccttca
gttcaacagtcgatgccacttagtgcattagaactaggtttggagacagaagcagtagtt
cctgttaaacaagaaccagagacaatgtctactcctgcactgttaaatgtgaggcagcag
cctccatctactacaacatttgtgctgaatcaaataaaccaacttccgaccttgggatct
acaattgtaatgactaaaacaccacctgcaacgaccaataggcaaaccatcactttaaca
aagtttatccagaccacggcaaacacacgcccttcagtctcagcaccagcagtacgaaat
cccatgccccctgctccttcaaaagaccaggttcaattgaaggatttactgaaaaatagt
agtctaaatgaactcatgaaactgaagccacctgctaacattgctcagccagttgcaact
gcagctactgatgtcagtaatggtgcagtaaaaaaagaatcttctaataaagaagtagca
aggatatggataaatgacatgaaaatgaggagtttttctcctaccatgaaggttcctgtt
gtgaaagaggaagatgaaccagaggaggaagatgaggaagaaatgggacatgcagagacc
tatgcagagtacatgccgataaaattgaaaattggcctgcgtcaccctgatgcagtagtg
gagactagctctttgtccagtgtcactcctcctgatgtttggtacaaaacatccatctct
gaagagaccattgataatggctggctctcagcattgcagctcgaggcagttacctacgca
gcccagcaacatgaaacattcctccctaatggagaccgtgctggcttcttaataggtgat
ggtgctggtgtgggtaaaggccggacaatagcagggatcatatatgaaaactatttgttg
agcagaaaaagagcattgtggtttagtgtatcaaatgacttaaaatatgatgctgaaaga
gatttaaaggatattggagcaaagaacattttggtccattcattaaataagtttaaatat
ggaaaaatttcttccaaacacaatgggagtgtgaaaaagggtgttatttttgctacctat
tcttctcttattggtgaaagccagtctggtggtaaatacaagaccaggttaaaacagctt
ctgcattggtgtggtgatgacttcgacggagtgatagtgtttgatgaatgtcacaaagca
aaaaatctatgtcctgttggttcctcaaagccaaccaagacaggcttggccgttttagag
cttcagaacaaattgccaaaagccagagttgtttatgccagtgccactggtgcttctgaa
ccacgtaacatggcctatatgaaccgtcttggaatatggggtgagggaactccattcaga
gaattcagtgattttattcaagcagtggaacgaagaggtgttggtgccatggaaatagtt
gctatggatatgaagcttagaggaatgtacattgcacgacagctgagctttactggagtg
accttcaaaattgaggaagttcttctttctcagagctatgttaaaatgtataacaaagca
gtcaagctgtgggtcattgctagagagcgatttcagcaagctgcagatttgattgatgct
gagcaaagaatgaagaaatctatgtggggtcagttctggtctgctcatcagaggtttttt
aagtacctgtgcatagcatccaaagtgaaaagggtagtacagctggcccgggaggaaatc
aagaatgggaagtgtgtggtaattggtctgcagtctacaggagaagcaagaactttggag
gccttggaagagggtggaggagaactaaatgattttgtttcgactgccaaaggtgtattg
cagtcactcattgaaaaacacttccctgctccagacagaaagaaactttatagtttgcta
ggaatcgatttgacagctccaagtaacaacagttcaccaagggatagtccttgtaaagaa
aacaaaataaagaaaaggaaaggcgaagaaataactcgagaagccaaaaaagcaaggaaa
gttggtggccttactggtagcagctctgatgacagtggaagtgagtctgatgtctctgac
aatgaggaaagtgactatgagagctctaaaaacatgagctctggtgatgatgacgacttc
aatcccttcagagatgaatccagtgaagacaacgaggatgatccttggttaattaggaaa
gagcacaagaaaagcaaagataaaaaaaagaagaaaagtatagatccagattccattcaa
agtgccttgttagcatcaggtcttggttcgaagcggcctagtttctcttctgcaccagtc
atctctcctgctcccaacagtgcaccagctaacagtaacaccaacagtaacagtagcctt
ataacgagtcaggatgctgtggaaagggcacagcagatgaagaaagacctgcttgataaa
ttagacaaattagctgaagacctccctcctaacaccctggatgaacttattgatgacctt
ggtggtcctgaaaatgtggctgagatgactggccgcaaggggcgggtggtgagcaatgat
gatggaagcatatcttatgagtcaaggactgaaattgatgtgcctgtggaaattctaaac
atcacagagaagcagaggtttatggatggaaagaagaatattgctattatctcagaagct
gccagctcaggtatttcattacaagcggatcggagagctcaaaatcaaaggcgaagagtt
cacatgactttggagttaccctggagtgctgatagggcgattcagcaatttggaagaaca
cacaggtcaaaccaagtaactgctccagagtatgtctttctgatttcggaactagctgga
gagcagagatttgcatctattgttgcaaagagacttgagagtttgggggcacttacacat
ggtgacagaagagcaacagaatctagagatctgagcaggttcaactttgataataagtat
ggaagaaatgctttggaaattgtcatgaaatccattgtaaacttagattctcctatggta
tcaccacctccagattaccctggagaattctttaaagatgttcgacaaggtctgatagga
gtgggcctgattaatgtagaagatcggtcaggaattcttactcttgataaagactataac
aatataggaaaatttttaaacagaattctgggcatggaggtgcatcagcagaatgcgttg
tttcagtattttgcagacactcttactgcagttgttcaaaatgccaagaagaatggaaga
tatgacatgggaatcctagatctgggttctggagatgagaaggtcaggaagagtgatgtg
aagaagtttctgactccaggttactcaacctctggccacgtagagctatacacaattagt
gtggagaggggaatgtcctgggaggaagcaaccaagatttgggcagagctgacaggaccg
gatgatggcttttacttatcattgcaaataagaaacaacaaaaaaactgcaatcttagtt
aaagaagtcaaccctaagaagaaactatttttaatttaccgaccaaacactgggaaacaa
ctcaaactagaaatttatgctgatctgaaaaagaaatataagaaggtagtctctgatgat
gctctggtacactggctggatcaatataattcttctgcagacacctgtactcatgcgtac
tggcgtggcaattgcaaaaaagcaagcttaggattgatatgtgagataggtctccgctgc
cgcacatactatgtgttatgtggctcagtactgagtgtctggacgaaagtggagggtgtt
ctggcctctgtcagtggcacaaatgtgaaaatgcagatagtgcggctaagaactgaagat
ggacagcggattgtaggtttgatcattccggcaaattgcgtgtctcctcttgtaaatctt
ctgtcaacttcagaccagtctcagcagctcgcagtccaacaaaagcagctgtggcagcag
catcacccacagagcatcaccaacttgagcaacacataa
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