Phodopus roborovskii (desert hamster): 127237224 Help Entry 127237224         CDS       T08852                                  Symbol Xab2 Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism prob  Phodopus roborovskii (desert hamster) Pathway prob03040   Spliceosome Brite KEGG Orthology (KO) [BR:prob00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     127237224 (Xab2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:prob03019]     127237224 (Xab2)    03041 Spliceosome [BR:prob03041]     127237224 (Xab2) Messenger RNA biogenesis [BR:prob03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      127237224 (Xab2) Spliceosome [BR:prob03041]  Complex B   Other components    Prp19-related factors     127237224 (Xab2)  Complex C     127237224 (Xab2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 TPR_12 TPR_2 TPR_8 Suf TPR_19 TPR_15 ARM_TT21 ARM_TT21_C TPR_1 TPR_21 TPR_16 Motif Other DBs NCBI-GeneID:  127237224 NCBI-ProteinID:  XP_051061307 UniProt:  A0AAV0A744 LinkDB All DBs Position Unknown AA seq 855 aa AA seqDB search MVVMARVPRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAVRTVMTVRDFTQVFDSYA QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK ATKVNFKQVDDLASVWCQCGELELRHENYDEALKLLRKATALPARRAEYFDGSEPVQNRV YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA QLEEEWGLARHAMAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA AEAERDQPPRAQSKIFFVRSDASREELAELAQQANPEEIQLGEDEDEDEMDLEPNEVRLE QQSVPAAVFGSLKED NT seq 2568 nt NT seq  +upstreamnt  +downstreamnt atggtggtgatggcgcgagttccgcgtcccgagcggccggatcttgtttttgaggaagag gatcttccctatgaagaagaaatcatgcggaaccagttctccgtcaaatgctggctccgc tacatcgagttcaaacagggggcccccaaaccccggcttaatcagttgtacgagcgggca ctcaagctgcttccctgcagctacaaactctggtaccgctatctgaaggcacgccgggca caggtgaagcatcgctgcgtgactgaccctgcctatgaagatgtcaacaactgccatgag agggccttcgtgttcatgcacaagatgccacgtctgtggctagactactgccagttccta atggatcagggacgagtaacacatacccgccgcacctttgatcgtgctctccgggcacta cccatcacacagcactctcgaatctggcccctgtatcttcgcttcctgcgctcccaccca ctgcctgagactgctgtgagaggctaccgtcgcttcctcaagctcagtcctgagagtgct gaggaatacatcgagtacctcaaatccagtgaccggctggatgaggctgcacagcgcctg gccacggtggtgaatgatgagcgctttgtgtccaaggcgggcaagtccaactaccagcta tggcatgagctgtgcgaccttatctcccagaatccggacaaggtacagtccctcaatgta gatgccatcatccgtggtgggctcacccgctttactgaccagctgggcaagctgtggtgc tccctggctgactactacatccgcagtggccacttcgagaaggctcgggacgtgtatgag gaggctgtacgcactgtgatgactgtgcgggacttcacccaggtgttcgacagctacgcc cagttcgaggagagcatgattgcggcaaagatggagactgcctctgaactggggcgtgag gaggaggatgatgtggacctggagttgcgcctggcccgttttgagcaactcattagccgg cggcccctactccttaacagcgtcctgctgcgccagaacccacaccatgtccatgagtgg cacaagcgtgtggccctgcatcagggccgcccccgggagattatcaacacatacacagag gctgtgcagacggtggaccccttcaaggccacaggcaagcctcacacactatgggttgca tttgccaagttttatgaagataatggacagctagatgatgcccgtgtgatcctagagaag gccaccaaggtgaacttcaagcaagtggatgacctggcaagcgtgtggtgccagtgtgga gagttggagctccggcatgagaattatgatgaggcattgaagctgcttcggaaagctaca gcattgcctgcccgccgggctgagtactttgatggttcggagcccgtgcagaaccgtgtg tacaagtcgctgaaggtgtggtccatgcttgctgacttggaggaaagtctgggcaccttc cagtcgaccaaggctgtgtatgaccgaatcctggacctgcgcatagccacaccacagatt gtcatcaactatgccatgttcctggaggagcataagtacttcgaggagagcttcaaggca tacgagcgtggcatctcactgttcaagtggcccaacgtgtcagacatctggagcacctac ctgaccaaattcattgcccgctatgggggccgcaagttggagcgtgcacgggacctcttc gagcaggcgttagatggctgcccacccaaatatgccaagaccctatacctgctttacgca cagctggaggaggagtggggccttgcccgtcatgctatggcagtgtatgatcgtgctacc agggcggtggagccagcccagcagtatgatatgtttaacatctacatcaagcgggctgct gagatctatggtgtcacccacactcgtggcatctatcagaaggcaattgaggtgctgtct gatgagcatgcccgtgagatgtgcctacggtttgcagacatggagtgcaaacttggtgag atcgaccgtgcccgggctatctacagcttctgctcccagatctgtgaccccaggacaact ggggcattctggcaaacatggaaggattttgaggttcggcacggaaatgaggacactatc agggagatgctgaggatacgtcggagtgtgcaggccacatacaatactcaggtcaacttc atggcttcacagatgctcaaggtgtcgggcagtgccacaggcaccgtgtctgacttggct cctgggcagagcggcatggatgacatgaagttgctagaacagcgggcagagcagctcgca gctgaggcagagcgggaccagcctcctagggcccagagcaagattttctttgtgagaagt gatgcatccagggaggagctggcagagctggctcaacaggccaaccccgaggagatccag ctgggcgaggatgaggacgaggatgagatggacctggagcccaatgaagtccgactggaa cagcagagtgtgccggctgctgtgttcgggagcctaaaggaagactga

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