KEGG   Phodopus roborovskii (desert hamster): 127237285
Entry
127237285         CDS       T08852                                 
Symbol
Arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob04144  Endocytosis
prob04517  IgSF CAM signaling
prob04519  Cadherin signaling
prob04530  Tight junction
prob04666  Fc gamma R-mediated phagosome formation
prob04810  Regulation of actin cytoskeleton
prob05100  Bacterial invasion of epithelial cells
prob05132  Salmonella infection
prob05135  Yersinia infection
Brite
KEGG Orthology (KO) [BR:prob00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    127237285 (Arpc1b)
   04519 Cadherin signaling
    127237285 (Arpc1b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    127237285 (Arpc1b)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    127237285 (Arpc1b)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    127237285 (Arpc1b)
 09150 Organismal Systems
  09151 Immune system
   04666 Fc gamma R-mediated phagosome formation
    127237285 (Arpc1b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127237285 (Arpc1b)
   05135 Yersinia infection
    127237285 (Arpc1b)
   05100 Bacterial invasion of epithelial cells
    127237285 (Arpc1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:prob04131]
    127237285 (Arpc1b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:prob04812]
    127237285 (Arpc1b)
Membrane trafficking [BR:prob04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    127237285 (Arpc1b)
Cytoskeleton proteins [BR:prob04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     127237285 (Arpc1b)
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_Aladin WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_Gbeta eIF2A Beta-prop_HPS5 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st PEP5_VPS11_N EIF3I RMC1_N WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 127237285
NCBI-ProteinID: XP_051061432
UniProt: A0AAV0A5X8
LinkDB
Position
Unknown
AA seq 372 aa
MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKRGAKWDKVHELKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVI
SICYFEQENDWWVCKHIRKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERP
APTPWGSKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLADADKKMAVATL
ASETLPLLAITFITENSLVAAGHDCFPVLFTYDSAAGTLSFGGRLDVPKQSSQRGLTARE
RFQNLDKKASSEGGAATGAGLDSLHKNSVSQISVLSGGKAKCSKFCTTGMDGGMSIWDVK
SLESALKDLKIK
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggcctaccacagcttcctggtggagcccatcagctgccatgcctggaacaaggatcgg
acacagatcgccatctgccccaacaaccatgaggtgcacatctatgagaagaggggcgcc
aagtgggacaaagttcacgaacttaaggagcacaatggacaggtgacaggcatcgactgg
gctcctgagagtaaccgcattgtgacctgcggcacagaccgcaatgcctatgtgtggaca
ctgaagggccgcacatggaagcccacactggtcatcctgcggatcaaccgagctgcgcgt
tgtgtgcgctgggcccccaatgagaacaagttcgccgtgggcagcggctcccgtgtcatc
tccatctgttattttgagcaggagaatgactggtgggtgtgcaagcacatcagaaagcct
atccgctccactgtcctcagccttgactggcaccccaacaacgtgctcctggctgcgggc
tcctgcgacttcaagtgcaggatcttctctgcctatatcaaggaggtggaggagcggcca
gcacctactccatggggctctaagatgccctttggggagctaatgtttgagtcgagcagc
agttgtggctgggtgcatggtgtctgcttctcagccagtgggagccgtgtggcttgggta
agccacgacagcaccgtgtgcctggcagacgctgacaagaagatggccgttgcaaccctg
gcctctgaaaccttgccgctcctggccatcaccttcatcacagaaaatagcctagtggca
gcgggccatgactgcttccccgtgctatttacctatgacagtgctgcgggtacattgagc
tttggtggacggctggatgtgcccaagcagagctcccagcgtggcctgacagcccgagaa
cgcttccagaatcttgacaaaaaggccagctctgagggtggtgcagccacgggcgctggc
ttggactcgctgcacaagaacagtgtcagccaaatctcggtgctcagcgggggcaaggcc
aagtgctcgaagttctgcactacaggcatggatggtggcatgagcatctgggatgtaaag
agcttggagtcagccttgaaggacctgaagatcaaatga

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