Phodopus roborovskii (desert hamster): 127237315
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Entry
127237315 CDS
T08852
Symbol
Wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04136
Autophagy - other
prob04140
Autophagy - animal
prob05010
Alzheimer disease
prob05014
Amyotrophic lateral sclerosis
prob05016
Huntington disease
prob05017
Spinocerebellar ataxia
prob05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127237315 (Wipi2)
04136 Autophagy - other
127237315 (Wipi2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
127237315 (Wipi2)
05014 Amyotrophic lateral sclerosis
127237315 (Wipi2)
05016 Huntington disease
127237315 (Wipi2)
05017 Spinocerebellar ataxia
127237315 (Wipi2)
05022 Pathways of neurodegeneration - multiple diseases
127237315 (Wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127237315 (Wipi2)
03029 Mitochondrial biogenesis [BR:
prob03029
]
127237315 (Wipi2)
Membrane trafficking [BR:
prob04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
127237315 (Wipi2)
Mitochondrial biogenesis [BR:
prob03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
127237315 (Wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
DUF7165
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_RSE1_2nd
BCAS3_WD40
VID27
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
127237315
NCBI-ProteinID:
XP_051061493
UniProt:
A0AAV0A8Q6
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MNLASQSGEAGAGQLLFANFNQDNTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DGMFLSASSNTETVHIFKLEAVREKPPEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICSLTTIQKIPRLLVGASDGYLYMYNLDPQEGGECALMRQHRLDGS
METTSEIVDSASHDCPLVTQTYGAAAAKGAYVPSSPTRLAKGQDANLEAYTDDLGAVGGT
CLEDEASALRLDEDSEHPPMILRTD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagccagagcggggaggccggcgccggccagctgctgttcgccaacttc
aaccaggataacacgtccctagctgttggtagtaagtccggatataagttcttttcgctc
tcttctgtggataagctggaacagatctatgaatgcactgacactgaagatgtgtgcatt
gtagagagattgttctcaagcagcttggtggctatcgtcagcctcaaagctcccaggaag
ctgaaagtttgccactttaagaaaggaactgagatttgcaactacagctactccaacacc
atattggctgtgaagctaaacaggcagaggctcattgtgtgtctggaagagtcgctctat
atacacaacatccgggacatgaaggtacttcataccatccgagagacacccccaaaccct
gcaggcttgtgtgcactgtcaataaacaatgacaactgctacttggcgtatccagggagt
gcgaccattggagaggtgcaggtcttcgacaccattaatttgagagctgcaaacatgatc
ccggctcatgacagtcccttagcagccctggcttttgatgcaagtgggaccaagcttgcc
actgcttctgagaaggggactgtgatccgggtattttccattccagaaggacaaaagctg
ttcgagttccggagaggagtgaagaggtgtgtgagcatctgctccctggccttcagcatg
gatggcatgttcctctctgcatccagcaacacagaaactgtacacatcttcaaacttgaa
gccgtgagggaaaaacctccagaagagcccaccacctggactggatacttcgggaaggtg
ctgatggcatctaccagctacctgccctcacaagtaacagaaatgttcaaccagggcagg
gcctttgccaccgtccgcctaccattctgtggccataaaaacatctgctcattaaccaca
attcagaagatccctcggctactggtaggagcatcagatggctatttatacatgtacaac
ctggacccgcaggaaggtggcgagtgtgctctgatgcgtcagcacaggcttgatggcagt
atggagacgaccagtgaaattgtagactctgcatctcatgactgccctttagtaacacag
acgtacggcgcagcagctgccaaaggtgcctatgtgccctcgtccccaacaagacttgct
aaaggacaggacgccaacttagaagcctacacagatgacctgggtgccgtggggggcaca
tgcctggaggatgaagccagcgccctgcgcctggatgaagacagtgaacatcctcccatg
attctccggactgactga
DBGET
integrated database retrieval system
