Phodopus roborovskii (desert hamster): 127237395
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Entry
127237395 CDS
T08852
Symbol
Zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob05202
Transcriptional misregulation in cancer
prob05206
MicroRNAs in cancer
prob05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
127237395 (Zeb1)
05206 MicroRNAs in cancer
127237395 (Zeb1)
09162 Cancer: specific types
05215 Prostate cancer
127237395 (Zeb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127237395 (Zeb1)
Transcription factors [BR:
prob03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
127237395 (Zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-C2HE
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
127237395
NCBI-ProteinID:
XP_051061608
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNTVVEANSDSDDEDKLHIVEEESITDAADCEGGMPED
ELPADQTVLAGGSDREGGAKNCWQDDVKDDECDSDAENEQNHDPNVEEFLQQQDTAIIYP
EAPEEDQRQGTPEASGQDENGAPDAFSQLLTCPYCDRGYKRFTSLKEHIKYRHEKNEDNF
SCSLCSYTFAYRTQLERHMTSHKSGREQRHVTQSGGNRKFKCTECGKAFKYKHHLKEHLR
IHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVNGRPRSGLKTSQCSSPSLSASP
GSPTRPQIRQKIENKPLQEPLSVNQIKTEPVDYEFKPIVVASGINCSTPLQNGVFSGGGQ
LQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVALDGNVIRQVLENNQASLASKE
QEAVSASSIQQGGHSVISAISLPLVDQDGTTKIIINYSLEQPSQLQVVPQNLKIENPAPT
NSCKSEKLPQDLTVKSEKDKSFDGAVDGSTCLLYDDCPGDLNALPELKHYDPEHPAQPPA
PAPEAEKPEASASSTRDGDLSPSQPPVKNLLSLLKAYYALNAQPNSEELSKIADSVNLPL
DVVKKWFEKMQAGQIPGQSPEPPSPETGTVNIAAKSDEQPQPADVSEPQEHSTSGQSPLK
MTTSSPVLPVGSAMNGSRSCTSSPSPLNLSSARTLQGYFCVADGAQEEPQVEPLDLSLPK
QQGELLERSTISSVYQNSVYSVQEEPLNLSCVKKEPQEDSCVTDSEPVVNVIPPSANPIN
IAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQVAYTYSTTVGPAMQEPPMKVI
QPNGNQDERQDTSSEGVSTVEDQNDSDSTPPKKKTRKTENGMYACDLCDKIFQKSSSLLR
HKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNH
RYSYCKREAEERDGTEQEQEEAGLEVLMNEHVGARASPSQADSDERESLTREEDEDSEKE
EEEEEDKEMEELQEEKECENAQGEEEEEEEEEEEEMDKAKQEAAAKTDGAVEDGAAQQAG
SLEQKASESSEQLSEEKTNEA
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaattataacactgtggtagaagcaaattcagattccgatgatgaagacaaactccac
attgtggaagaagaaagcatcacagatgcagctgactgtgaaggtggcatgcccgaggat
gagctgccagccgaccagacagtgttagcaggaggcagcgacagggaaggcggtgccaag
aactgctggcaagatgacgtaaaagatgatgaatgcgactcagatgcagaaaatgagcaa
aaccatgatccgaatgtggaagagttcctgcaacaacaagacacagccatcatttaccct
gaggcgcccgaggaggaccagcggcagggcacgccagaagccagcggtcaagacgaaaat
ggagcaccagatgcattttcccaattgctcacctgtccatattgcgatagaggctacaag
cgctttacctctttgaaagagcacattaagtaccgccatgaaaagaatgaagacaatttc
agctgctccctgtgcagttatacctttgcatacagaacccagcttgaacgccacatgaca
tcacataagtcaggaagagagcaaagacatgtgacgcagtctgggggcaatcgtaaattc
aagtgcactgagtgtggaaaagctttcaaatacaaacaccacctgaaagagcacttacga
atccacagtggagagaagccatatgaatgcccaaactgcaagaaacgtttttcccattct
ggttcctatagctcacacataagcagtaagaagtgtattagcctgatgcctgtgaatggg
aggcccagatcaggactcaagacatcacagtgttcctcaccatctctttcggcatcacca
ggcagtcccacacgcccacagatacggcagaagatagagaataaaccccttcaagaaccg
ctttctgtaaaccaaatcaaaactgaacctgtggattatgagttcaaacccatagtggtt
gcttcaggaatcaactgttcgacccctttacaaaacggggtttttagcggtggtggccaa
ttgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctgccaacagttggt
ttggtatctcccataagtatcaatttaagtgacattcagaatgtacttaaagtggcacta
gatggtaacgtaatacggcaagttttggagaataatcaagccagtcttgcatccaaagag
caagaagcagtcagtgcttcatccatccagcagggtggccattctgttatctctgccata
agtcttcctttagttgatcaagatggaacaaccaaaatcatcatcaactatagtcttgag
cagcctagccagcttcaggttgtccctcagaatttaaagatagagaacccagcccctaca
aacagctgcaaaagtgagaagttaccacaagaccttactgttaagtcagagaaggacaaa
agctttgatggggctgtggatggtagcacttgccttctgtatgatgattgcccaggagac
ctcaatgcacttccagaactaaagcactatgacccagagcaccctgcccagcctccagcc
cccgccccagaagctgagaagcccgaggcctctgcttcgtcaaccagagatggtgatttg
tctcccagtcagccacctgtaaagaacctcctgtcgctcttaaaagcctactatgctctg
aacgcgcagccaaactcagaagagctctcaaagatcgctgattctgtgaacctgcctctg
gatgtagttaaaaagtggtttgaaaagatgcaagctggacagattccagggcagtctcct
gagccaccttctccagaaacaggcacagtaaacatcgctgcaaagagcgatgaacagcct
caacctgcagatgtaagtgagccccaggaacacagcacaagtggacagagtcctctcaag
atgaccaccagctccccagttttaccagtaggatcagccatgaatggttccagaagttgc
acatcatccccatcacctctaaacctttcctcggccaggaccctgcagggttacttttgt
gtggcagacggtgcccaggaggaaccccaagtagaacctcttgatctctcactaccaaag
caacagggagagctactggaaaggtcgactatcagcagtgtttaccagaacagtgtttat
tctgtccaggaagagcccttgaacttgtcttgtgtaaaaaaggagccacaggaggacagc
tgtgttacagactcagaaccagttgtaaatgtaatcccaccaagtgccaaccccataaat
attgctattcctacagtcactgcccagttacccaccatcgtggccattgctgaccagaac
agtgttccctgcttacgtgcactggctgccaacaagcagactattctgattccccaggtg
gcttatacatactctaccacagtcggccctgcaatgcaagagccaccgatgaaggtaatc
cagccaaatggaaaccaggatgaaaggcaagacactagctcggaaggggtctccaccgtg
gaggaccagaacgactctgactctacgccacccaaaaagaaaactcggaagacagagaat
ggaatgtatgcctgtgacctgtgtgacaagatatttcagaagagcagctcactgttgaga
cacaaatatgaacacacaggtaaaagacctcatgagtgtggaatctgtaaaaaggcattt
aaacacaaacatcatttgattgaacacatgcgattacactctggagaaaagccctatcaa
tgtgacaagtgtggcaagcgcttctcacactcgggatcttactctcagcacatgaatcac
cgctactcctactgcaagagagaagcagaagaaagagatggcacagagcaggagcaggaa
gaggcggggctggaagtcctgatgaatgagcatgtgggtgcacgggcatctccctcacag
gctgactcggatgagagagaaagtttgacaagggaggaggatgaagacagtgaaaaggag
gaagaggaggaggaagataaagagatggaagaattgcaggaagaaaaggaatgtgaaaat
gcacagggggaggaggaagaggaagaggaggaagaggaggaggagatggacaaagccaag
caggaggcagcagctaagactgatggtgcggtggaggatggggctgcccagcaggcaggc
agcttggagcagaaggcaagtgagagcagcgagcaactgtcggaagagaagacaaatgaa
gcctag
DBGET
integrated database retrieval system
