Phodopus roborovskii (desert hamster): 127237471
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Entry
127237471 CDS
T08852
Symbol
Smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127237471 (Smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prob03021
]
127237471 (Smarca5)
03036 Chromosome and associated proteins [BR:
prob03036
]
127237471 (Smarca5)
Transcription machinery [BR:
prob03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
127237471 (Smarca5)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
127237471 (Smarca5)
RSF complex
127237471 (Smarca5)
WICH complex
127237471 (Smarca5)
B-WICH complex
127237471 (Smarca5)
NORC complex
127237471 (Smarca5)
BRF complex
127237471 (Smarca5)
NuRF complex (fruit fly)
127237471 (Smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
127237471
NCBI-ProteinID:
XP_051061738
UniProt:
A0AAV0A7V4
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MSSAAEPPPPPPPESAPSKAAAAGAGGSSSSGNKGGPEGVAAPAAPSCAAGAGPADAEME
EVFDDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLK
MKPGRPRVKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGK
LRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKS
TLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKK
FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVF
NSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKM
QREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLV
TNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQ
DSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQT
KTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGAT
HVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDY
REKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPP
RLFELLEKEILYYRKTIGYKVPRSPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLT
QGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEK
IMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML
HKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKE
KAEKKKRGPKPSTQKRKMDGAADGRGRKKKLKL
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggcggccgagcctccgccgcccccgcctcccgagagcgcgccttccaaggca
gcggccgcgggcgccggcgggagcagcagcagcggcaacaaaggcggccccgagggcgtc
gcggcgccggcggctccgtcgtgtgcagcgggcgcgggccccgcggacgccgagatggag
gaagtatttgatgatgcatcacctgggaagcaaaaagaaatccaagaaccagatcctaca
tacgaagaaaaaatgcaaactgaccgagcaaatagatttgagtatttattaaagcagaca
gagctgtttgcacatttcattcagcctgctgctcagaagactccaacctcacccttgaag
atgaaaccagggcgcccacgggtaaaaaaagatgaaaaacagaatttgctctcagttggc
gactaccgacaccgtagaacagagcaagaggaggatgaagagctgttaacagaaagctcc
aaagcaactaatgtctgcactcggtttgaagattctccatcatatgtaaaatggggtaaa
ttgagagattatcaagtccggggattgaattggctcatctctctgtatgaaaatggcatc
aatggtatccttgcagatgaaatgggtttgggaaagacacttcaaacaatttctctcctt
gggtatatgaaacactatagaaatattcctggacctcatatggttttggttcccaagtct
acattgcacaactggatgagtgaattcaagagatgggtaccaacacttagatctgtttgc
ttgataggagataaagagcaaagagctgcatttgtcagggatgttttattaccaggagag
tgggatgtgtgtgtcacatcttatgaaatgcttattaaagagaagtctgtgttcaaaaaa
tttaactggagatacttagttatagatgaagctcacaggataaaaaatgaaaaatctaag
ttgtcagaaatagtgcgggaattcaagactacaaatcgactgttgctaactgggacgcct
cttcagaacaacttgcatgaactctggtcacttctcaattttttgttaccagatgtgttt
aattcagctgatgactttgattcctggtttgatacaaataattgccttggggaccaaaag
ctagttgagaggcttcatatggttttgcgtccattcctcctacgtcgaattaaagctgat
gttgaaaagagtttgcctccaaagaaagaagtaaaaatctatgtgggtcttagcaaaatg
caaagggaatggtatactcggatattaatgaaggatatagacatattaaactcagcaggg
aagatggacaaaatgaggttattgaacattttgatgcagttgaggaaatgctgcaatcat
ccatatctcttcgatggagctgaacctggtccaccttacacaacagatatgcatctagtt
accaatagtggcaaaatggtggtattagacaagctgctccctaaattaaaagaacaaggt
tcaagagtactaatcttcagtcagatgactagggttttagacattttggaagattattgc
atgtggagaaattatgagtactgcagattggatgggcagacaccccatgatgagagacag
gactccatcaatgcatacaatgaaccaaatagcacaaagtttgtttttatgctaagcaca
cgtgctggtggtctgggcatcaatcttgcaacagctgatgtagtaattttatatgattca
gattggaatccccaagtagaccttcaggccatggaccgagctcatagaattggacaaacg
aagactgtccgagtgtttcgctttataactgataacactgtagaagaaagaatagtagaa
cgtgcagagatgaaactcagattggattcaatagtcattcagcaagggaggcttgtagat
cagaacctgaacaaaattgggaaagatgaaatgcttcaaatgattcgacatggggccaca
catgtgtttgcatcaaaagaaagtgaaatcactgatgaggatattgatgggattttggaa
agaggtgcaaagaagactgcagagatgaatgaaaagctctccaagatgggtgaaagctca
cttagaaactttacaatggacacagagtccagtgtttataactttgaaggagaagactac
agagaaaaacagaagattgcgtttacagagtggattgaaccacctaaacgagaaaggaaa
gccaactatgctgttgacgcgtatttcagggaagcactccgtgttagtgaacctaaagca
cccaaggcacctcgacctccaaagcaaccaaatgttcaggatttccagttctttcctcca
cgtttatttgagttactggaaaaagaaattctatattacaggaaaaccattgggtacaag
gtacctcggagtcctgacctacctaatgcagcacaggcacagaaagaagaacaacttaaa
attgatgaagcggagcctcttaatgatgaggagctagaggaaaaagagaagcttctgaca
caggggtttaccaattggaataagagagactttaaccagtttatcaaagctaatgagaag
tggggtcgtgatgatattgaaaatatagccagagaagtagaaggaaaaactccagaagaa
gtcattgaatactcagctgtgttttgggaaagatgcaatgagctccaggacatagagaag
attatggctcagattgaaaggggagaggcaagaattcaaagaagaataagtatcaagaaa
gcactagatacaaagattggaaggtacaaagcaccctttcatcagctaagaatatcctat
ggtactaacaaagggaaaaactacactgaagaagaggaccgttttctcatctgtatgctg
cacaaacttggatttgacaaggaaaacgtttatgatgagttacgacaatgtattcgaaac
tcccctcagttcagatttgattggtttctcaagtccagaactgcaatggagctgcagagg
aggtgtaataccttaattactttgattgaaagagaaaatatggaactagaagaaaaggag
aaggcagagaaaaagaagagaggaccaaagccttcaacacagaaacgtaaaatggatggt
gccgctgatggtcgaggaagaaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
