Phodopus roborovskii (desert hamster): 127237800
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Entry
127237800 CDS
T08852
Symbol
Ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prob03400
]
127237800 (Ascc3)
Enzymes [BR:
prob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127237800 (Ascc3)
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
127237800 (Ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
AAA_30
T2SSE
Motif
Other DBs
NCBI-GeneID:
127237800
NCBI-ProteinID:
XP_051062148
LinkDB
All DBs
Position
Unknown
AA seq
2202 aa
AA seq
DB search
MALPRLTGALRSFSNVTKQDNYNEEVADLKLKRSKLHEQVLDLGLTWKKIVQFLNEKLEK
NEMQSINEDLKDILQAAKQIVGTDNGREAIESGAAFLFMTFHLTESVGHMETKAIRQMFG
PFPSSSATAACNATNRIISHFSQDDLTALVQMAENHCNDRVCFGKNLAFSFDMHDLDHFD
ELPINGEAQKTISLDYKKFLNEHFQEQDTPELKPVEKTNGSFLWCEVEKYLNATSKEMTE
APRIEDLCCTLYDMLASVKSGDELQDELFELLGPEGLDLIEKLLQNRITIVDRFLNSSND
HKFQVLQDSCKKILGENAKPNYGCQVTIQSEQEKQLMKLYRREEKKIARREKKAGDDGEV
SGEGLLSFDPKELRIHREQALLNARSAPILGRQRDMETEKIRYPHVYDSQIEARETSAFI
AGAKMILPEGIQRENTKLYEEVRIPHSEPMPVGFEEKPVYIQDLDEIGQLAFKGMKRLNR
IQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGAIKKNEFKIVYVAPM
KALAAEMTNYFSKRLEPLGIVVKELTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDV
ALSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVAT
FLHVNPYIGLFYFDGRFRPVPLGQTFLGIKSANKMQQLNNMDEVCYESVWKQVKAGHQVM
VFVHARNATVRTAMSLIERAKNSGQISYFLPSQGPEYGHALKQVQKSRNKQVRELFSDGF
SIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFV
DLGILDVMQIFGRAGRPQFDKFGDGVIITTHDKLSHYLSLLTQQNPIESQFLESLADNLN
AEIALGAVTNVEEAVKWISYTYLYVRMRANPLAYGISHKAYQIDPTLRKHREQLVIEVGQ
KLDKAKMIRFEERTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDIFAIVSKAE
EFDQIKVREEEVEELDALLNNFCELSAPGGVENSYGKINILLQTYISRGEMDSFSLISDS
AYVAQNAARIVRALFEIALRKRWPTMTYRLLNLSKVIDKRLWGWASPLRQFSVLPPHILT
RLEEKNLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEASIQPITRTVLRVS
LSIHPDFSWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLALKKQVVNKEAQLLVFTIPI
FEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPVTALGCKAYE
ALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRIFNKYPTSKAVYIA
PLKALVRERMDDWKIRIEEKLGKKVIELTGDVTPDMKSIAQADLIVTTPEKWDGVSRSWQ
NRNYVQQVTILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDL
ADWLNIKQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSHSPAKPVL
IFVSSRRQTRLTALELIAFLATEEDPKQWLNMDEQEMENIIGTIRDSNLKLTLAFGIGMH
HAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFP
ITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEI
AGGTITSKQDAMDYITWTYFFRRLIMNPSYYSLDDVSHDSMNKFLSHLIEKSLVELEQSH
CIEVGEDNRSIEPLEYGRIASYYYLKHKTVKMFKDRLKPECSTEELLSILSDAEEYTDLP
VRHNEDHTNSELAKCLPIELNPHSFDSPHTKAHLLLQAHLSRAMLPCPDYDTDTKTVLDQ
ALRVCQAMLDVAASQGWLVTALNITHLVQMVIQGRWLKDSSLLTIPNIEQHHLHLFRKWK
PPVKGPHAKCRTSIECLPELIHVCEGKDHVFTSMVENELQSAKAKQAWNFVSRLPVINVG
ISVKGSWDDLVEGHNELSISTLTADKRDDNKWIKLHADQQYVLQVSLQRVHFGFHKGRHE
SYAVTPRFPKLKDEGWFLILGEVDKRELIALKRVGFVRSHHDVSLSFFTPETPGRYIFTL
YFMSDCYLGLDQQYDIYLNVTKENISAQVNTKVSDAFTDLTV
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atggccttacctcggctcacaggagccttgcgctccttttcaaatgtcaccaagcaagat
aattataatgaagaagtagctgacttaaagctgaaacgatccaagcttcatgaacaagtt
ttagatttggggctcacctggaagaagatagtccaatttttgaatgaaaaacttgagaag
aatgaaatgcaaagtataaatgaagacttaaaagatatacttcaagctgcaaaacaaatc
gttggaacagataatgggagagaagcaattgaaagtggagctgcatttctctttatgaca
tttcacttgacagagtctgttggtcacatggagacaaaagccatcagacagatgtttggt
ccctttccatcgtcttctgctactgctgcttgtaatgccactaatcgaattatttctcat
tttagtcaagatgatctgactgctcttgtccagatggcagaaaatcactgtaatgataga
gtgtgttttggtaaaaacttagcattttcctttgacatgcatgatctggaccactttgat
gaattgccaataaatggtgaagcccagaaaactataagcttagactataagaagttcctg
aatgaacattttcaggagcaggacaccccagaactcaagcctgtggaaaaaacaaatggt
tcctttttgtggtgtgaagttgagaagtacttaaatgcaacttcaaaggaaatgactgaa
gcaccgagaattgaagatctttgctgtaccttatatgacatgcttgcttctgttaaaagc
ggtgatgaacttcaggatgagctttttgaattgctgggacctgaaggacttgatctgatt
gaaaaactcctccagaacagaattacaattgtagatcgatttcttaattcttcaaatgac
cataagtttcaggttcttcaagatagttgtaaaaaaattttaggagagaatgccaagcct
aattatggatgtcaagttactattcaatctgaacaagaaaagcagttaatgaaactctat
cgccgtgaagaaaaaaaaattgccagacgagaaaaaaaggctggagacgatggcgaagta
tctggggaaggcctgttgtcctttgatcctaaggaactccggatacacagagaacaggca
cttctgaatgctagaagtgctccaattctgggcaggcaaagagacatggaaactgaaaaa
atccgttatccccatgtttatgattcccagattgaggctcgagaaacatcagcattcatt
gctggtgccaagatgattttaccagaaggaattcaaagagagaatactaaactgtatgaa
gaagtacgcattcctcatagtgaaccaatgccagttggatttgaggaaaagccagtttat
atccaagacttagatgagattggacagttggcttttaaaggaatgaagagactcaatcga
atccagtccatagtatttgagactgcctacaacaccaatgagaacatgctgatttgtgcc
cctactggagctgggaagaccaacattgcaatgcttacagttttacatgaaatccgccaa
cattttcaacaaggtgctattaaaaagaatgagtttaagattgtgtatgttgctccaatg
aaagccttggcagctgaaatgacaaattacttcagcaaacgtctagagccactgggcatt
gttgtgaaagaattgactggagatatgcagttgtcaaaaagtgaaattttacgaactcag
atgcttgtgaccacaccagaaaaatgggatgtagtaacaagaaaaagtgttggggatgtt
gctctttctcaaattgtaaaactcctgattcttgatgaagttcatttacttcatgaagac
cgaggcccagtgctagaaagcatagttgccaggaccttacggcaggttgaatccacacag
agtatgataagaattcttggactgtctgcaaccttacccaactaccttgatgttgctaca
tttttgcatgttaacccttacattggacttttttactttgatggccgttttcgaccggta
cctctaggacagacatttttaggtattaaaagtgcaaataagatgcaacagttgaataac
atggatgaagtatgctatgaaagtgtttggaaacaagtaaaggctggacaccaggttatg
gtatttgtacatgctcgcaatgccactgtaaggacagccatgtctctaatagaaagagca
aaaaatagtggccagatttcctactttctgcctagccaaggaccagagtatggacatgca
ttaaaacaggtgcaaaagtcaagaaataagcaagtgcgagaattattctcggatggcttt
agcattcatcatgcagggatgcttcgacaagacaggaatttggttgaaaacttgttttca
aatgggcatatcaaagtcctagtctgtacagccacattagcctggggtgtcaatcttcct
gcgcatgctgttattattaagggaacacaaatatatgctgccaaaagaggctcctttgtt
gaccttggaattttagatgtcatgcagatatttggccgagccgggcgaccacaatttgac
aaatttggggacggagtcattataacaacacatgataaactcagccattacctcagttta
ctcactcaacaaaacccaatcgagagtcagtttctggaaagccttgcagataacctaaat
gcagagattgctctaggagcagttaccaatgtggaagaagcagtgaagtggataagttac
acttacctctatgtgcgcatgagagcaaatccattagcatatggcatcagtcataaagca
taccagattgacccaacattaagaaaacatcgagaacaactagtcattgaagttggacaa
aagctggataaggctaagatgattcgttttgaagagcgaactggttatttttcctccact
gatctgggtagaactgccagccactactatattaaatacaacaccatcgagacatttaat
gaactctttgatgcacacaaaacagaaggtgatatctttgctattgtctccaaagctgaa
gaatttgatcaaattaaggtcagagaagaagaagtagaggagctagatgccttgttaaac
aatttttgtgaactctcagctcctggaggtgtggaaaatagttatgggaaaataaacatc
ttgcttcagacctacattagccggggagagatggacagtttctcgctcatatcagattct
gcatatgttgctcagaatgcagctagaattgtccgtgctctctttgaaattgctctgagg
aaacgctggcctaccatgacctacaggcttctcaatcttagtaaagtcattgacaaaaga
ctctggggttgggctagccctttgagacagttttctgtgttaccaccacacattctgaca
agattagaagaaaaaaaccttactgtggataagctcaaagacatgagaaaagatgaaatt
ggtcacattttgcatcatgtgaatattggactgaaggttaaacagtgtgttcatcagatt
ccttctgttacaatggaagcttccattcagcccatcacacggactgtcctccgagtatca
ctgagtatccacccggatttctcatggaatgatcaggtccatggaacagtaggggaacca
tggtggatttgggtagaagatcctacaaatgaccatatttatcactcggagtacttttta
gctcttaaaaaacaggttgttaataaagaagctcaacttctggtgtttaccatccctatt
tttgagcctttgccctctcagtactatattcgagcagtgtctgataggtggctaggagct
gaagctgtttgcattatcaactttcagcatctgattctaccagagagacatcctccccat
acagaactgttggaccttcagcctttaccagtcacagcattgggatgtaaagcatatgaa
gctctatataacttcagccacttcaacccagtacagacacaaatattccacacgttgtat
cacacagactgtaatgtcctacttggagcccccactggatcaggaaagacagttgcagcc
gaactagccattttcagaatcttcaacaaatatcccacttcaaaggcagtatatattgca
cccctaaaagctctagtccgtgaaagaatggatgattggaaaattaggatagaagaaaaa
cttggtaaaaaagttattgaactgacaggggatgtgactccagacatgaaatccattgct
caagctgaccttattgtcactacaccagagaagtgggatggagtcagtcggagctggcag
aataggaactacgttcagcaggttaccattctcatcatagatgagatccatctgcttggt
gaggagagaggtccagttctagaggtcattgtatctcgaacaaattttatctcatcacac
acagagaagcctgttagaatagttggactgtccactgcattagctaatgctagagacctt
gctgactggctcaatattaagcagatgggtttgttcaactttcgaccatcagttcgccca
gttcctctggaagtccacattcaaggtttcccgggtcaacattactgcccacgcatggcc
agtatgaacaagcctgcgtttcaagcaattagaagtcattctccagccaaacctgttttg
atatttgtctcatcaagacgacaaactcgacttactgctttagagttgatagcttttctg
gctactgaagaagacccaaaacagtggttgaatatggatgagcaagagatggagaacatc
attgggacaatacgagattccaacctgaagctgactctagcttttgggataggaatgcat
catgctggactgcatgaaagagaccgaaaaactgtagaagagctgtttgtgaactgtaaa
gttcaggttctcattgctacaagcacattagcatggggtgtaaactttccagctcactta
gtaattattaaaggaactgaatattatgatggaaaaacaagacgttatgtggattttccc
atcacagatgtgctacagatgatggggcgagctgggagacctcagtttgatgaccagggc
aaagctgtaattctcgttcatgatataaaaaaagatttttataaaaaatttctctatgaa
cctttcccagtggaatcaagcttgttaggagtgctttctgaccacttaaatgctgagatt
gctggaggtacaataacatctaagcaagatgcaatggattatatcacgtggacttacttt
ttccgacgtcttatcatgaaccccagctactacagcttagatgatgtcagccatgactcc
atgaacaagttcctgtcacacctgatcgagaagtctctggttgaattggagcaatcccac
tgcattgaagttggagaggataaccgcagcattgagccactagaatatggccgaattgcc
tcctattactatttgaaacacaaaacagtcaaaatgttcaaggaccgtttgaaacctgag
tgcagcactgaagaattgctttcaattctgagtgatgctgaagaatatacagacttgcca
gtaagacacaatgaagaccatacaaacagcgaattggccaaatgtcttcccattgaatta
aatcctcattcatttgacagtcctcacaccaaagcacatctcttgcttcaggcccatctc
agccgagccatgcttccctgcccagattacgacactgataccaaaacagtcttggatcaa
gcactcagagtgtgtcaggccatgctggatgtggctgcaagccagggctggctggtgact
gccctgaatatcacccacctggttcagatggtgatccaaggccggtggctaaaagactca
tcccttcttacaataccaaacatagaacagcaccatcttcaccttttcaggaaatggaaa
ccacctgtaaagggcccacatgctaagtgccgaacatccattgagtgccttcctgaattg
atccatgtctgtgaagggaaagaccatgtattcacctccatggtggaaaatgagttacaa
tcagcaaaagcaaagcaggcatggaattttgtatctcggttgccagtgataaatgttggc
ataagtgttaaaggctcatgggatgacttagtcgaaggacataatgaactctccatctca
actttgacagcagacaaacgagatgacaacaaatggatcaagttgcatgctgatcagcag
tatgtgcttcaagtcagcctgcagagagtccattttgggttccacaagggaagacatgag
agttatgcagttactcctcgatttcccaaattaaaagatgaaggatggtttttgatatta
ggagaggtggataagagagagctaattgctttaaaacgagtaggatttgttcgaagtcat
catgatgtctccctctctttctttactcctgaaacacctggaagatatatcttcaccttg
tatttcatgagtgactgttatctcggcctagaccagcagtatgacatttatctcaatgtc
acaaaagagaacatttctgcacaggtcaacacaaaggtctctgatgccttcactgacttg
acagtataa
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integrated database retrieval system
