Phodopus roborovskii (desert hamster): 127237801
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Entry
127237801 CDS
T08852
Symbol
Shprh
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127237801 (Shprh)
Enzymes [BR:
prob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127237801 (Shprh)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127237801 (Shprh)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
TPR_10
zf-RING_2
PEP-utilisers_N
TPR_12
LMBR1
Zmiz1_N
TPR_2
Motif
Other DBs
NCBI-GeneID:
127237801
NCBI-ProteinID:
XP_051062149
UniProt:
A0AAV0A5W7
LinkDB
All DBs
Position
Unknown
AA seq
1676 aa
AA seq
DB search
MSSRRKCAPPVKVDEERRRQLHWDMHEDLRNEPLSSTVEEQPCSGADSSSDYIIIDDDPP
EDAVHRDKKRRSEAVGTLESTEREAQLSVKLNVTISPCGVDHSWKAFLGDFALRLLPEES
LVENFSERSFTLMNSESSNQFLICVHSECKDAEKQESVCRELDNVCGKGLRVESSFSIDV
LQDLAWLQKKRGIKLYQRPEGNTVKVGIYILEAGLTRLDFMSDASSRMKKFNQLMKRVME
KLHNFIIPDVLEEDEEDSESEPEGQDIDELYRFVKQTHQQETQSAVQVDVQHPALIPVLR
PYQRDAVNWMLQQERFRGVPAGDNSLHFLWREIVTPDGLRLYYNPYTGCIIRDFPHAGPQ
LLGGILADEMGLGKTVEVLALILTHTRQDVKQDGLTLPEGKVVNYFIPSHCPRGKVKNRE
IQDTECEPKEKVHCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIFRYDVQRNRSLLKR
MLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDICDKTKKQVVGSPRKIQKELRKSVNKD
TDSEYLPSNTSDDDDDPYYYYCKARRNRSKLRRKPVLLTKKEKRQPISPDSHVYSPAAGD
SANTDANVSESAPASEDKQTQEAEELAGSQPATDESAHSHTVSPCETSDYRFECICGEFD
QIGRKPRVQCLNCHLWQHAKCVNYEEKNLKVKPFYCPHCLVAMDPVSTRATLIISPSSIC
HQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSELNYVDIPHS
NSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPTVKAAEMAQRLSGINRWCIS
GTPVQRGLEDLFGLVVFLGIEPYCVKHWWIRLLYRPYCKKSPQHLYSFIAKILWRSAKKD
VIDQIQIPPQTEEMHWLHFSPVERHFYHRQHEVCCQDAVVKLRKISDWALRLSSLDRRTV
ASILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCAL
NGLAGIHIIKGEYASAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLAAKHPGIP
PTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALQPVQQSIRELQRKIHSNSPWWLNVIQ
RAIEFSIDEELVQRVRNEISSNYKQQTDKLSMSEKFRDCRGLQFLLTTQMEELSKFQKLV
REAVKKLERPPSRDVIESATICHLRPARLPLNCCVFCKADELFTEYESKLFSNTVKGQTA
IFEEMIEDEEGLVDDRVPTTTRGLWAISETERSMKAILSFARSHRFDVEYVDEGSVSMDL
FEAWKKEYKLLHEYWMTLRNRVSAVDELAMATERLRVRHPKEPKPNPPVHHIIEPHEVEQ
NRIKLINDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGINPEPCPICARQLGKQWAVLT
CGHCFCNECTSIIIEQYSVGSHRSSIKCAICRQTTSHKDVSYVFTSEKANQEDDIPVKGS
HSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFTQISRIKTFQEN
LSAFKHDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPT
IVHRFLIKATIEERMQTMLKTAERSHTSSSGKHSEASVLTVADLADLFTKETEELE
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccggaggaagtgtgctcccccagtgaaggtcgatgaggaaaggcggcggcag
cttcactgggacatgcacgaagacctgaggaatgaacccctgtcctcgactgttgaggag
cagccctgctccggtgcagactcttcttctgattacatcatcatagacgatgaccctcct
gaagatgcggtccacagagataagaagaggcgttccgaggctgtgggcaccttagaatcc
actgaaagagaggcccagttgtctgtcaagttgaatgttacgatttctccctgtggtgtc
gatcattcttggaaagcatttctgggagattttgctcttcggcttctccctgaagagagt
ttagttgaaaatttttctgaaaggagttttacattgatgaattcagagtcaagcaatcag
ttcctgatctgtgtccattcagaatgtaaagatgcagagaaacaagaaagcgtatgcaga
gaactggacaatgtttgtggaaagggccttcgagtggaatcgtccttcagtatcgacgtg
ttacaggatttggcctggctgcagaagaaaagagggataaaactttatcagagaccagaa
ggaaatacggtcaaggttggaatttatatcttggaagctggtctaacaagactagacttt
atgagtgatgcaagttcaagaatgaaaaagttcaatcagctcatgaagagagtgatggaa
aagttacataattttattattccagatgtgctggaagaagatgaggaggattcggagagt
gagccagagggccaggacattgatgagctctatcgcttcgtgaagcaaacacaccagcaa
gaaacacagtcagcagtccaagtggatgtccagcatcctgcattgatcccagtactcaga
ccgtaccagagagacgcagtcaactggatgctacaacaagagcgtttcagaggcgtccct
gctggtgacaactccctgcacttcttgtggcgagaaattgttacacctgacggtttgaga
ctctactataatccatacacaggctgcatcattcgtgatttcccacatgctggaccacag
ttgcttggtggaatcttagccgatgagatgggtcttggaaagacagtggaggttctggcg
ctgattctgacgcatactcgacaagatgtcaaacaagatggtctcacccttcctgagggg
aaagtggtgaattatttcatcccatctcactgtccaaggggaaaagtaaaaaatagagaa
atccaggatacagaatgtgaaccaaaagaaaaagttcactgcccccctacccgtgtgatg
atcctaacagctgtgaaagaaatgaatgggaaaaagggagtttctattctctctatctat
aagtatgtcagctccatattcagatacgatgttcagcggaacaggagtcttctgaagcgg
atgctgaagtgtttaatctttgaaggtctcgtgaaacagatcaaagggcatggtttctct
gggacttttacactggggaagaactacaaagaagaagatatctgtgataaaacaaaaaag
caggtggtgggaagtccaaggaagattcagaaagagttaaggaagtcggtgaacaaggac
acagattctgaatacctgccatcaaacacttctgacgatgacgatgatccttactattac
tactgtaaggccagaagaaaccgtagtaaactgaggagaaagcctgttttactcacgaag
aaggaaaagaggcagcctatcagtccagattcccatgtttactctcctgctgctggtgac
tctgcgaacaccgatgctaatgtgtcggaaagtgcacctgcctccgaagacaagcaaacc
caagaagcagaagagcttgctgggtctcagcccgctactgatgagtcggcacattctcac
accgtgagtccctgtgagacctctgattaccgctttgagtgtatatgtggtgaatttgac
cagattggccggaagccgagagttcagtgcctgaactgtcacctgtggcagcatgcgaag
tgtgtgaattacgaggagaagaatctgaaggtgaagcctttttactgcccccactgcctt
gttgcaatggacccagtgtcaacaagagcaactctgattatctctccaagttccatttgc
caccagtgggtggatgaaatcaaccgccatgtgaggtcatcctctcttcgagttttggta
tatcaaggagtaaagaaagatggcttcttacagcctcattttttggcagaacaagatata
gttatcattacgtatgacgtccttcgttcagaactaaactatgtcgatatcccacatagc
aatagtgaggatggacgtcgcctgaggaaccagaagcgctatatggccatccccagcccc
ctggtagcggtggagtggtggagaatctgtcttgacgaagctcagatggttgaatgtccc
acagtaaaagctgcggagatggcccagcgtttgagcgggattaatcgttggtgcatcagt
ggcaccccagtgcagagaggactggaggatctttttgggctggtggtctttcttgggatt
gagccttactgtgtcaaacactggtggattcgacttctctatcgcccgtactgcaagaaa
agtcctcagcatctctacagttttattgccaagatactgtggaggtctgccaagaaagat
gtcattgaccaaatccagatcccacctcagactgaagaaatgcactggctccacttttcc
cccgtggagagacatttctatcaccgccagcatgaggtgtgctgccaggacgccgtggta
aagctcaggaagatctccgactgggccctgagactgagcagcctggacagaaggactgtg
gcctccatcctgtatcctctgctccggctcaggcaggcctgctgccatccacaggctgtt
cgtggggagttcctgccactccagaagagcaccatgacaatggaggagctgctgacgtct
ctgcagaagaaatgtggaacagagtgtgaagaggcccacaggcaactagtttgtgcctta
aacggcttagcaggcatccatatcattaaaggtgagtacgcctcggcagcagagctatac
agggaagtattacgctcctctgaggagcacaaaggaaaactcaaaacggattcgctgcaa
agacttcatgccacacataacttaatggagctgttggcagccaaacacccagggattcct
cccaccttaagagatggcagacttgaagaagaggccaagcagctcagagagcactatatg
agcaagtgtaacacagaagttgctgaagcccagcaagctctgcagcctgtgcagcagtcc
atacgggagctccaaaggaagattcattctaattctccttggtggctgaatgtaatccag
agagcaattgaattttctattgatgaggaacttgttcagcgggtgcgaaatgaaataagc
agtaactacaagcagcagactgacaagctgtctatgtcagagaagttccgtgactgcaga
ggtcttcaattcttactcacaacacaaatggaagagctcagtaagttccagaagctagtg
agagaggctgtgaagaagctggagagacctccatcccgtgatgtgatcgagtctgcaacc
atctgccacctgcggccagctagactccctctgaactgctgcgtcttttgtaaagctgat
gaattgttcacagagtatgaatcaaagctattttcgaacacagtcaaaggccagactgca
atctttgaagaaatgatagaagatgaagaaggacttgtggatgatagagtacctactact
acccggggcctgtgggcgataagtgagacagagcgatctatgaaagcaatattgtcattt
gcaagatcacataggtttgatgttgaatatgtagatgaaggaagtgtttcaatggacctc
tttgaagcatggaagaaggaatataagttacttcatgaatactggatgactctgagaaat
cgtgtgtcagctgttgatgaactcgcaatggctacagagcgactaagagtgcgccatccc
aaggagccaaagccaaacccgcctgtccatcacatcattgaaccacatgaggttgaacaa
aatcgtataaaactgataaatgataaagctgttgctacatcacagctccagaaaaaactc
ggacagcttctttacctgacaaatttggagaagtctcaagacaaaacatcaggaggtatt
aatccagagccttgtccaatctgtgctcgacagctgggaaaacagtgggcggtgctgacc
tgtggacactgtttctgtaatgagtgcacgtctatcataattgaacagtacagtgtcggc
tctcatcgaagctccatcaagtgtgccatctgccgccagaccacgtcacacaaagacgtg
tcctatgtctttacctcggagaaagcaaaccaagaggacgatatccctgtgaagggtagc
cattctacaaaagtggaagctgtggtcagaacgctgatgaaaatacagcttagagaccca
ggggccaaagcactcgttttctctacgtggcaagatgtattagatattatttcaaaagct
ctcaccgacaacaacatggaatttacgcaaatcagtcgcattaagacattccaggagaac
ctctcagcatttaagcatgatcctcaaatcaatattttgctgctgcccctacacacgggc
tctaatggattaactatcattgaagccactcacgtgctcttggtggagcccatcctgaac
cctgcccatgagcttcaggccattggaagggtacacagaattggacagacaaaacctact
attgtacatagattcttaattaaagcaacaatagaagaacggatgcagacgatgctgaaa
actgctgagaggagtcacacaagctcgtccgggaagcattctgaagcctctgtattgacc
gtggctgacctggcagacctatttactaaagaaacggaggagctggaatga
DBGET
integrated database retrieval system
