KEGG   Phodopus roborovskii (desert hamster): 127237882
Entry
127237882         CDS       T08852                                 
Symbol
Nedd1
Name
(RefSeq) protein NEDD1
  KO
K16547  protein NEDD1
Organism
prob  Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:prob00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:prob03036]
    127237882 (Nedd1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:prob04812]
    127237882 (Nedd1)
Chromosome and associated proteins [BR:prob03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     127237882 (Nedd1)
   Microtubules and associated factors
    gamma-tubulin ring complex
     127237882 (Nedd1)
Cytoskeleton proteins [BR:prob04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     127237882 (Nedd1)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WDR55 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_RFWD3 EIF3I WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_Vps41 WD_LRWD1 NBCH_WD40 WD40_like PROPPIN KNTC1_N RMC1_N Cytochrom_D1
Other DBs
NCBI-GeneID: 127237882
NCBI-ProteinID: XP_051062247
UniProt: A0AAV0A9W7
LinkDB
Position
Unknown
AA seq 660 aa
MQENLRFASSGDDIKIWDASSMTLVDKFNPHTSPHGISSLCWSSNNNFLVTASSSGDKIV
VSSCKCKPVPLLELAEGQKQTCVDLNSTSMYLASGGLNNTVNIWDLKSKRVHRSLKDHRG
EVTCVAYNWNDCYIASGSLSGEIILHSVTTNTSSAPFGHGSNQPVRHVKYSLFRKSLLGS
VSDNGAVTLWDVNSQSSYHSFDSTHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKK
LVKTLVADTPLTAIDFMPDGATLAIGSSHGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQ
YSTSLTKPSLNKGCSNKATSVNKWSVAVSGSAGAAQNSGTIREAPAPSVATVLPQPVTTA
VGRGAVAAQDKAGLHRSINTDILSKETDGGKSQDFSNFDDTGKSSLGDMFSPVRDDGVVN
KGVDESAGKGDGLDFLAQLNSVFTSRKNPITSGTLVLHSSPLNVFMDSPGKEENESHDLT
TETKKTFLGKQEPKDSLKQFTKLISSGAEPGILNPSPSSNQIRNLENFEKPEKETEAQLI
HDPSVYGSSTPIPKVTSSVTAGVASSLSEKIVDTLGNSRPNAPLTSVQIRFIQNMIQETL
DDFRETCHRDIVNLQVEMIKQFHMQLNEIHSLLERYSVNEGLVAEIERLREENKRLRTHF
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgcaggaaaacctcagatttgcttcatcaggagatgatattaaaatatgggatgcttca
tctatgacattggtggataaattcaacccccacacgtcaccacatggaatcagttcatta
tgttggagcagcaataataacttcctagtgacagcatcttccagtggtgacaaaatagtg
gtgtcaagttgcaaatgcaaacccgttccgcttttggagcttgctgaagggcaaaagcag
acatgtgtcgatttaaattctacatcaatgtatctggcaagtggaggcctaaataacact
gttaatatttgggatttaaaatcaaaacgagttcatcggtctcttaaggatcatagaggt
gaagtaacttgtgtggcatacaattggaatgattgctacattgcttctgggtctctcagt
ggtgagattattttgcacagcgtaaccactaatacatccagtgcaccatttggccatggg
agtaatcagcctgtccggcatgtgaaatactccttgtttaggaagtctctcctcggcagc
gtttcggataatggagcagtgaccctctgggatgtgaacagtcagagttcataccacagc
tttgacagtacccacaaggctccagcttctggcatctgtttctctcctgtcaatgaattg
ctgtttgtaaccataggcctggataagagaatcatcctctatgacacttcaagtaagaag
ctagtgaaaactttggtggctgacactcctctgacagcaatagattttatgcctgatgga
gccactttggctattggatcttcccatgggaaaatatatcaatatgacttaaggatgctg
aagtctcccgtgaaaacaatcagtgcccacaagacatctgtgcagtgtatagcatttcag
tattccacgtctctgacgaagccaagtttaaataaaggctgctcaaataaggccacatcg
gtgaacaaatggagtgttgctgtgagtggtagtgctggagctgctcagaattccggaacc
atcagagaagcacctgccccttccgttgccacagtcctcccacagcccgtgacaacagct
gtgggcagaggagccgttgctgcgcaggacaaagcaggcttgcatcgaagcataaataca
gatattttatctaaggaaacagatggtggaaaaagtcaagatttctccaactttgatgat
actgggaaaagtagcttaggtgacatgttctcaccagtcagagatgatggtgtagttaac
aaaggagttgatgaatctgcaggcaaaggagatggtcttgactttctagcacaactgaac
tcagtgttcacctcaagaaaaaatccaatcacttccggcactctggtgttgcactccagt
cctcttaatgtctttatggattctccagggaaagaggaaaatgaaagtcatgatctgacc
actgagacgaagaaaacattcctggggaagcaggagccgaaggactccttgaagcagttt
acaaagttgatctcctctggtgctgagcctggaattctgaatccctctccatcatctaac
caaataagaaatctagaaaactttgaaaagccagaaaaagaaaccgaagcccagttgatt
catgacccctcagtctatggatcctcaactccaattccaaaggtaacgtcctctgtcact
gctggagtagccagttcgctctcagaaaaaatagtcgatacccttgggaacagtcggcca
aatgcacccttgacctctgttcaaatccggttcattcagaacatgatacaagaaactttg
gatgacttcagggaaacttgccatagggacattgtgaatttgcaagtggagatgattaaa
cagtttcatatgcaactgaatgaaatacactctttgctggaaaggtactcggtcaatgaa
ggcttggtggctgaaatcgaaaggcttcgagaggagaacaaaagactgcggacccacttc
tga

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