Phodopus roborovskii (desert hamster): 127238095
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Entry
127238095 CDS
T08852
Symbol
Blm
Name
(RefSeq) recQ-like DNA helicase BLM
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03440
Homologous recombination
prob03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127238095 (Blm)
03460 Fanconi anemia pathway
127238095 (Blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prob03032
]
127238095 (Blm)
03400 DNA repair and recombination proteins [BR:
prob03400
]
127238095 (Blm)
Enzymes [BR:
prob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127238095 (Blm)
DNA replication proteins [BR:
prob03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
127238095 (Blm)
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
127238095 (Blm)
Bloom's syndrome complex (BTR)
127238095 (Blm)
FA (Fanconi anemia) pathway
127238095 (Blm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM_N
BDHCT_assoc
DEAD
BDHCT
Helicase_C
RecQ_Zn_bind
RQC
HRDC
IDM1_C
Motif
Other DBs
NCBI-GeneID:
127238095
NCBI-ProteinID:
XP_051062516
UniProt:
A0AAV0A6P3
LinkDB
All DBs
Position
Unknown
AA seq
1412 aa
AA seq
DB search
MAAVPLNNLQEQLQRHSAKKLNNKFSLAKPKSSGFTFKKKTSEGDVSVTSVPVVKTPVLT
DKDVNVSESSPSTKSPLHTPKQQPGTDGFFKNSLGGQQAKGTEPSLLDLVHIPQEVVCTT
PKTPAVKKPHIAVFKKLEFTSSPDSLNDWADMDDFDISASHAFVSLTRTPVIRVSTAQKP
KKTNRNFFKPPLHKAGVVKAGLTLSSPESSQVDLTKEQKEKSDCLSSDVIYIDSDPGSEE
LVKKDTQESQSLETQLGVERDNSEKKNHIDEVKLQSTEEALYCQHGDDDYDIDFVPPSPE
EEIMSTASSSSKCFSILKDLDDSDKEKDILSTSKDLLSKPEEMPTQESDPGTNTDCDDKQ
MSVQQQLIRVMEHICKLVDTVPVDELKALNCGNELLQQRNIRRKLLAEAEFNGKDVSLLS
SLWRCKLDSHGNTVQGDSCPVGHPSKELTSPSFPSHSLPTEECLPTTTSGKTGFSATTKT
LLERPLLNSHLQKSFVSDNWAETLRIEKRNESTYFPGNVLTSTAVKDQNKHTASRNNLER
EVQASYDIDNFNIDDFDDDDDDDWENIMHSFSASKSSTAAYPPIKEGGPVKSMSERISSA
KTKSLPVVSTAQNKKLSESIQSYTDKLEQNLSSKKLKHEHFQSLNFPHTKEMMKIFHKKF
GLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVDQ
VQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENL
YERKLLARFVIDEAHCVSQWGHDFRQDYKRMSMLRQKFPSVPVMALTATANPRVQKDILT
QLKILKPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDT
MADTLQRDGLAALAYHAGLSDSARDEVQNKWINQDGCQVICATIAFGMGIDKPDVRFVIH
ASLPKSVEGYYQESGRAGRDGEVSHCVLFYTYHDVTRLKRLIMMEKDGNYHTKETHFNNL
YSMVHYCENITECRRIQLLAYFGEKGFNPDFCKKYPDVSCDNCCKTKDYKTKDVTDDVKN
IVRFVQEHSSSPGTRTIGPSGRFTLNMLVDIFLGSKNAKIQSGIFGKGSSYSRHNAERLF
KKLILDKILDEDLYINANDQPIAYMMLGTKAQNVLNGHLKVDFMETENSSSIKKQKALVA
KVSQREEVVKKCLGELTEVCKLLGKVFGVHYFNIFNTATLKKLAESLSSDPEVLLQIDGV
TEDKLEKYGAEVIPVLQKYSEWTLPAEDSSPGTSLMGSRGTGRSAPEEPEEEEEPVSSHY
FTNQSRNERKRKKMPAFQRPKRRRTSYGGFKAKGVSTASRKTSSKSKFSGVTGSSSVSCA
SQATSVASRKLGIMAPPKPVNRAFLRPSYAVS
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgttcctctgaacaacctacaggagcaactgcagcgccactcggccaaaaaa
cttaataataaattcagccttgcaaaaccaaaatcttcaggttttacttttaaaaagaaa
acgtcagagggcgatgtgtctgtaactagtgtgccagtggtaaaaacacctgtattaact
gataaagatgtgaatgtatctgagtcctctccatctactaagtctccactccacacaccc
aagcagcagcctgggaccgatggcttctttaaaaattctctgggaggacagcaagccaag
gggactgaaccatcactgctggacttggtgcacattcctcaggaagttgtatgtactacc
cccaaaaccccagctgtaaagaaaccccacattgctgttttcaagaaattagaatttact
tcttcaccagattccctcaatgattgggctgatatggatgactttgatatttcagcatca
catgcatttgtttcgctgaccagaacccctgtcataagagtaagcaccgctcagaaacca
aaaaagactaacagaaacttttttaaaccaccactccataaagcaggtgtggtgaaggct
ggtttgactctgtcttcccctgaaagctcgcaagtggatttaactaaggaacagaaggaa
aagtcggattgcctaagcagtgatgtgatttacatcgatagtgaccctggttctgaagaa
ctcgtgaaaaaagacactcaggaaagtcagtctttggaaactcaattgggagttgaaaga
gataatagtgaaaagaagaaccacatagatgaagttaaattacaatcaactgaggaagct
ctatactgtcagcatggcgatgatgattatgatatagattttgttcccccttctccagag
gaagaaattatgtctacagcttcttcctcttcaaaatgcttcagtatactaaaggatctt
gatgactctgacaaagagaaagacattcttagcacctcaaaagatcttttgtcaaaacca
gaggaaatgcctacacaggagtctgatccaggaaccaatacagactgtgatgataaacag
atgagtgtacagcagcagcttattcgtgtgatggagcacatctgtaaattagtcgatact
gttcctgttgatgaactgaaagctttgaattgtgggaatgagctgcttcaacagcgaaac
ataagaaggaagcttctggccgaagctgagtttaatggaaaggatgtcagtcttctaagt
tcactgtggagatgtaagcttgactcacatggcaacactgtacagggtgattcctgccct
gtggggcatcctagtaaagagttaacttctccatcctttccctcacattcccttcccact
gaggaatgcttaccaaccaccacttcagggaagacaggattctcagccaccacgaagact
ctccttgaaaggcccttattgaattcccatttacagaagtcctttgtaagtgacaactgg
gctgaaacactaaggatagaaaaaagaaacgaaagcacttatttcccaggaaatgttctc
acaagcaccgctgtgaaagatcagaacaaacacactgcttcaagaaataacttagagaga
gaagtccaggcttcctatgatattgataattttaacattgatgactttgatgatgatgat
gatgatgactgggaaaatataatgcacagtttttcagccagcaaatcctccacagctgcc
tacccacctatcaaggaaggtgggcctgttaaatctatgtcagagaggatctcttcagca
aagacaaagtctcttccagtggtgtcaactgctcaaaataaaaaactctcagagtcaatt
cagagttacactgataagttggaacaaaacttgtcatcaaaaaagctgaaacatgaacat
tttcaaagtcttaattttcctcatacaaaagaaatgatgaagatttttcataagaaattt
ggcttacataattttagaactaatcagctagaggcgatcaatgctgcgctgcttggtgaa
gattgttttatcctaatgcccactggaggtggtaaaagtttgtgttaccagctgcctgcc
tgtgtttctcctggggtcactattgtcatttctcccttgagatcgctaatagtagatcaa
gttcaaaagctaacttcctttgatattcctgctacatatctgacgggggataagactgac
tcagaagctgcaaatatttacctccaattatcaaaaaaagacccaattatcaagcttttg
tatgttactccagaaaaggtctgtgcaagtaacaggctgatttccactctggagaatcta
tatgagcggaagctcttggcacgctttgtcattgatgaagcacactgtgtgagtcagtgg
ggtcatgattttcgtcaagattacaaaaggatgagtatgcttcgccagaagtttccttca
gttccagtgatggctctcaccgccacagcgaaccccagggtacagaaggacatcctcaca
cagctgaagatcctcaaacctcaggtgtttagcatgagctttaacagacacaatctgaaa
tactatgtgttaccaaagaaacccaaaaaagtggcatttgattgcctagaatggatcaga
aaacatcacccatatgactcggggataatttactgcctctccaggagggaatgtgacaca
atggctgacacgttacagagagatggtcttgctgctctggcttaccatgcaggcctcagt
gattctgccagagatgaggtgcagaacaagtggatcaaccaggatggctgccaggttatc
tgtgcaacaattgcatttggaatgggaattgacaaacctgatgtgcgatttgtgattcat
gcatctctccctaaatctgtggagggttactaccaagaatccggccgagctggaagagat
ggggaagtctctcactgcgtgcttttctatacctatcacgatgtgactagactgaagaga
ctcataatgatggaaaaagatggaaactatcatacaaaggagacgcacttcaataattta
tatagcatggtacattactgtgaaaatataacagaatgcagaagaatacagcttttagct
tactttggtgaaaaaggatttaaccctgatttttgtaagaaatacccagatgtttcttgt
gacaattgctgtaaaacaaaggattataaaacaaaagatgtgacggatgacgtaaaaaat
attgtaagatttgttcaagaacacagttcatcaccaggaacaagaactataggtccttct
ggacgatttactctgaacatgctggttgacattttcttggggagtaagaacgcaaagatt
cagtcaggaatatttggaaagggatcttcttattcacgacacaatgctgaaagactcttt
aaaaagctgatactggacaaaattttggatgaagacttatatatcaatgccaatgaccag
ccaatcgcctatatgatgctaggaactaaagcccagaatgtgctaaatggccatttaaaa
gtggacttcatggaaacagaaaattccagcagcataaaaaaacaaaaagctttagtggcc
aaagtatcccagagagaagaagtagttaagaaatgtcttggagaacttacagaggtctgc
aaattgctggggaaagtctttggtgttcattacttcaatatttttaatacagctacactc
aagaagcttgcagaatctttatcttctgatcctgaggttttgcttcagattgatggtgtt
actgaagacaagctggaaaaatatggtgcagaagtgattccagtattgcagaaatactca
gaatggacattgccagctgaggacagttccccaggcacaagcctgatgggcagcagaggc
actggaaggagcgctccagaggagcctgaggaggaggaggagcctgtgtcttctcactac
tttacaaatcaatctagaaatgaaagaaagaggaagaaaatgccagccttccaaaggccc
aagaggagaagaactagttacggtggcttcaaagcaaagggggtctctactgcaagcaga
aaaacgtcttctaaaagtaaattctctggtgtaactggatccagctcggtctcatgcgct
tctcaagcaacatcggtggcaagtaggaaattggggattatggctcctccgaagcctgta
aatagagcgttcctcaggccttcatatgcagtctcctaa
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integrated database retrieval system
