Phodopus roborovskii (desert hamster): 127238317
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Entry
127238317 CDS
T08852
Symbol
Nr1d2
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
127238317 (Nr1d2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127238317 (Nr1d2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
prob03310
]
127238317 (Nr1d2)
Transcription factors [BR:
prob03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127238317 (Nr1d2)
Nuclear receptors [BR:
prob03310
]
1. Thyroid hormone like
1D. Rev-Erb
127238317 (Nr1d2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
LpxD
Motif
Other DBs
NCBI-GeneID:
127238317
NCBI-ProteinID:
XP_051062844
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All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MELNAGGVIAYISSSSSASSPASCHSEGSENSFQSSSSSVPSSPNSSNSDANGNPKNSDV
SSIDSVLKSDCTDCPVKTGKPGAPGMTKSHSGMTKFSGMVLLCKVCGDVASGFHYGVHAC
EGCKGFFRRSIQQNIQYKKCLKNESCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIP
KREKQRMLIEMQSAMKTMMNTQFSGHLQNDTLAERHEQSTLPAQEQLRPKTQLEQENLKG
SPPPSSDFAKEEVIGMVTRAHKDTFLYNQEHRENSAESMPPQRGERIPRNVEQYNLNHDH
CGNGLHSHFPCSESQQHLSGQYKGRNIMHYPNGHTICIANGHCVNFSSAYAQRVCDRVPL
DGFSQNENKNSFLCNTGGRMHLVCPMSKSPYVDPQKSGHEIWEEFSMSFTPAVKEVVEFA
KRIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAG
DLLSSMFEFSEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLI
MKNHPNEASTFTKLLLKLPDLRSLNNMHSEELLAFKVHP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaacgcgggaggtgtgattgcctacatcagttcctccagctctgcctccagc
cctgcctcttgtcacagtgagggttctgagaacagtttccagtcctcgtcctcatccgtt
ccatcttctccaaatagctctaactctgatgccaacggaaatcccaagaacagtgatgtc
tctagcatcgacagtgtcttgaagagtgattgcacagattgtcctgtgaaaacaggcaaa
cctggtgctcctggcatgaccaagagtcacagcggtatgacaaaatttagtggcatggtt
ctactgtgtaaagtctgtggggatgtggcgtcaggattccactatggagttcatgcttgt
gaaggctgtaagggtttctttcggaggagcattcagcaaaacatccaatacaagaagtgc
ctgaagaacgagagttgctctatcatgaggatgaacaggaacagatgtcagcagtgtcgc
tttaagaagtgtctgtcggtgggaatgtcaagagatgctgttcgatttggccgaattcct
aagcgtgagaaacagagaatgctaattgaaatgcagagtgcaatgaagaccatgatgaac
acccagttcagtggccacctgcaaaatgacaccttagcagagcgacatgaacagtcaact
ctaccagctcaggagcagctgcggcctaagacccagttggagcaagaaaacctcaaaggc
tctcctcctccctcttctgattttgcaaaggaggaagtgattggcatggtgactagagcc
cacaaggatacctttttgtataatcaagagcatcgagaaaactcagctgagagcatgcca
ccccagagaggagaacggattcccaggaacgtggagcaatataatttaaatcatgaccac
tgtggcaatgggcttcacagccactttccctgtagtgagagccagcagcatctcagtgga
cagtacaaagggaggaacataatgcattacccaaatgggcatacgatttgtattgcaaat
ggacactgtgtgaacttctccagtgcttatgctcaaagagtctgtgatagagttccatta
gatggattttctcagaatgagaacaagaatagcttcctgtgcaacactggagggaggatg
catctggtttgtcctatgagcaagtctccatatgtggatcctcagaagtctgggcatgaa
atctgggaagaattttcaatgagttttacaccagcagtaaaagaagtggtggaatttgcg
aaacgcatccctggtttccgagatctgtctcagcatgaccaggtcaaccttttaaaagct
ggcacttttgaggttctaatggtacgatttgcttcgttatttgatgcaaaggagcggact
gtcacctttttaagtgggaaaaagtacagtgtggatgacctgcactcaatgggagcaggg
gatctgctcagttctatgtttgagttcagtgagaagctgaatgccctccagctcagtgat
gaagagatgagtttgttcactgcagtcgtcctggtatctgcagatcggtctggaattgaa
aatgtcaactcagtggaagctttgcaagaaacgctcatccgtgcactaaggaccttaatc
atgaaaaaccatccaaatgaggcttccacttttacaaaattacttctcaagttgccagat
cttcgatctttaaataatatgcactccgaggagctcttggcctttaaagttcacccgtaa
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