Phodopus roborovskii (desert hamster): 127238325
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Entry
127238325 CDS
T08852
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-40S ribosomal protein S27a-like
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03010
Ribosome
prob04120
Ubiquitin mediated proteolysis
prob04137
Mitophagy - animal
prob04140
Autophagy - animal
prob05012
Parkinson disease
prob05022
Pathways of neurodegeneration - multiple diseases
prob05167
Kaposi sarcoma-associated herpesvirus infection
prob05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
127238325
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127238325
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127238325
04137 Mitophagy - animal
127238325
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
127238325
05167 Kaposi sarcoma-associated herpesvirus infection
127238325
09164 Neurodegenerative disease
05012 Parkinson disease
127238325
05022 Pathways of neurodegeneration - multiple diseases
127238325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
prob03011
]
127238325
04121 Ubiquitin system [BR:
prob04121
]
127238325
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prob04147
]
127238325
Ribosome [BR:
prob03011
]
Ribosomal proteins
Eukaryotes
Small subunit
127238325
Archaea
127238325
Ubiquitin system [BR:
prob04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
127238325
Exosome [BR:
prob04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127238325
Exosomal proteins of colorectal cancer cells
127238325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
Ubiquitin_5
TBK1_ULD
DUF2604
FAD_binding_6
Motif
Other DBs
NCBI-GeneID:
127238325
NCBI-ProteinID:
XP_051062863
LinkDB
All DBs
Position
Unknown
AA seq
155 aa
AA seq
DB search
MQIFVKTLTWKTITLEIEPSDTIENVKAKIQDXEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGSAKKKKKSYTTPKKNKHKRRKVKLAVLKYYKVDENGKISRLRREC
PSDECGAGLFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttttgtgaagacccttacgtggaaaaccatcacactcgagattgaaccctcg
gacactatagaaaatgtaaaggccaagatccaggatnaggaaggaattcctcctgaccag
cagaggctgatctttgctggaaagcaactggaagatggccgtactttgtctgactataac
attcaaaaggagtctacccttcatcttgtgttgagactccgtggtagtgctaagaagaag
aagaagtcttacaccactcccaagaagaataagcataagagaaggaaggttaagttggct
gtgctgaagtattataaggtggatgaaaatggcaaaataagtcgccttcgacgagagtgt
ccatctgatgaatgtggtgctggacttttcatggctagccattttgacagacattactgt
ggcaagtgttgtctgacttattgcttcaacaaaccagaagacaagtag
DBGET
integrated database retrieval system
