Phodopus roborovskii (desert hamster): 127238356
Help
Entry
127238356 CDS
T08852
Symbol
Npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127238356 (Npas1)
Transcription factors [BR:
prob03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127238356 (Npas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
127238356
NCBI-ProteinID:
XP_051062891
UniProt:
A0AAV0A8E8
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MATPYPRSSGRGEVKCGGGRGASVPWDFLPGLMVKAPPGPCLQAQRKEKSRNAARWRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAVAPPAGLA
PGRRGPVALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGS
SVFDYIHPGDHSEVLEQLGLRAATPGPATPPSMSSSSSSSSSSSLVDTPEIETSPSEASP
AFRVQERSFFVRMKSTLTKRGLNVKASGYKVIHITGRLRSRALGLVALGHTLPPAPLAEL
PLHGHMIVFRLSLGLTILACESRVSDHMDMGPSELVGRSCYQFVHGQDATRIRQSHLDLL
DKGQVVTGYYRWLQRAGGFVWLQSVATVAGNGKSAGEHHVLWVSHVLSQAEEGQTPLDAF
QLPAMASHKDQPSPGPEPTEEEPPVDPKQAVPVDQDKDKDPQARGKCIKVEPGPKEARGS
EDSGEEELSDPPAPPRPEFTSVIRAGALKHDPVLPWGLTTPGDPSPALLHAGFLPPVVRG
LCTPGTIRYGPAELSLMYPHLHRLGPGPTLPEAFYPTLGLPYPGPTGTRVQRKGD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccctatcccagaagcagcggccgaggtgaagtcaagtgcgggggaggccgt
ggagccagcgtcccctgggatttcctgcccgggttaatggtcaaggccccgccaggaccc
tgcctgcaggcgcagcgcaaagagaagtcccgcaacgcggcgcgctggcggcgcgggaag
gaaaatctagagttcttcgagctggccaaactgctccctctgcccggtgccatctccagc
caactggacaaggcgtccatcgtgcgtctcagtgtcacttacctccgcctgcgtcgcttc
gctgcgctgggggcaccgccctgggggttgagggccgtcgcgcctccggcgggcctcgcc
ccaggccgccgaggccctgtggctctggtctctgaagtcttcgaacaacacctgggtgga
cacatccttcagtccctggatggcttcgtgttcgccctgaaccaggaaggaaaattcctc
tacatctcagagacagtgtccatctacctgggtctctcacaggtggagctgaccggcagc
agcgtcttcgactacatccatcccggggaccactcagaggtattggagcaactgggactg
cgggctgcgaccccggggcccgcaacgccgccttccatgtcatcctcttcctcctcctca
tcttcctcctcgctggtggacacccccgaaattgaaaccagcccctctgaggcatcccct
gccttccgggtccaggagcgttccttcttcgtccgcatgaagtccacccttaccaagagg
ggcctgaacgtcaaagcctcaggttacaaggtcattcacataacagggcgcctgaggtcc
cgagccctgggtctggtggcgcttggacacacgctgcccccagccccgctggctgagctg
cctctgcacggacatatgattgtcttccgcctcagcctgggcctcaccatcctagcttgt
gagagcagagttagcgaccatatggacatgggaccctcggagctggtcggacgcagctgc
taccagtttgtccatggacaggacgcaaccaggatccgtcaaagccatctggacctgctg
gacaaaggtcaggtggtgactggttactaccgttggctgcagcgtgcggggggcttcgtg
tggctgcaatctgtggccactgtggccgggaacgggaagagtgccggggagcatcacgtg
ctgtgggtcagtcacgtgctaagccaagctgaagagggccaaacacccctggatgccttc
cagcttccagccatggcatctcataaggatcaacccagcccaggcccggagcccacagag
gaagagcctccagttgacccgaagcaggctgtcccagtggaccaggacaaggacaaggac
cctcaggccagaggcaaatgcatcaaagtggagcctggtccgaaggaagctagaggctca
gaggacagtggagaggaggaactctcagaccctccagccccacctcggccagaattcact
tccgtcatccgggcaggggccctgaagcatgatccagtactgccgtggggcctaacaact
cccggggacccctcgcctgccctccttcatgcaggcttcctgccaccggtggtgcgaggc
ctgtgcacaccaggcaccatccgctatggccctgcagagttgagcctgatgtatccacat
ctgcacaggctgggccccggtcccacactcccagaggccttttaccctacgctgggcctg
ccctatccagggcccaccggtactagggtacagcggaagggagactaa
DBGET
integrated database retrieval system
