Phodopus roborovskii (desert hamster): 127238403
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Entry
127238403 CDS
T08852
Symbol
Trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04360
Axon guidance
prob04724
Glutamatergic synapse
prob04726
Serotonergic synapse
prob04929
GnRH secretion
prob04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
127238403 (Trpc1)
09154 Digestive system
04972 Pancreatic secretion
127238403 (Trpc1)
09156 Nervous system
04724 Glutamatergic synapse
127238403 (Trpc1)
04726 Serotonergic synapse
127238403 (Trpc1)
09158 Development and regeneration
04360 Axon guidance
127238403 (Trpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
prob04040
]
127238403 (Trpc1)
Ion channels [BR:
prob04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127238403 (Trpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
127238403
NCBI-ProteinID:
XP_051062961
UniProt:
A0AAU9YTI2
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MGAPPPSPGLPPSWAAMMAALYPSTDLSGVSSSSLPSSPSSSSPNEVMALKDVREVKEEN
TLNEKLFLLACDKGDYYMVKKILEENSSGDLNINCVDVLGRNAVTITIENESLDILQLLL
DYGCQSADALLVAIDSEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVI
LAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPA
LIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEV
ILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRR
KPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLY
SLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNS
LYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILG
PLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSNDTF
HSFIGTCFALFWYIFSLAHVAIFVTRFSYGDELQSFVGAVIVGTYNVVVVIVLTKLLVAM
LHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIVPSPKTICYMISSLSKWVCS
HTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNEL
RQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgggggccccgcctccgtccccgggcctgcccccgtcgtgggccgcgatgatggcggcc
ctgtacccgagcacggacctctcgggcgtctcctcctcctccttgccttcctccccatcc
tcctcgtcgcccaacgaagtgatggcgctgaaggatgtgcgggaggtgaaggaggagaac
accctgaatgagaagcttttcttgctggcgtgcgacaagggtgactattatatggttaaa
aagattttggaggaaaacagttcaggtgacttgaacataaattgcgtagatgtgcttggg
agaaatgctgttaccataactattgaaaacgaaagcttggatatactgcagctgcttttg
gactacggttgtcagtccgcagatgcacttttggtggcaatcgactctgaagtagtggga
gctgttgatatactacttaatcatcgaccaaaacgatcatcaagaccaactatagtaaaa
ctaatggaacgaattcagaatcctgaatattcaacaacaatggatgttgcacctgtcatt
ttagctgctcatcgtaacaactatgaaattcttacaatgcttttaaagcaggacgtgtct
ttgcccaagccccatgcagttggctgtgaatgcacgctgtgttctgcaaaaaacaaaaag
gacagcctcagacattccagatttcgtcttgatatctatagatgtctggccagtccagct
ctaataatgttaactgaggaggatccaatcctgagagcatttgaacttagtgctgactta
aaggaactcagcctcgtggaagtggaattcaggaatgattatgaagagctagcccgtcag
tgcaaaatgtttgctaaagatttgcttgcacaagcccggaattcacgtgaactggaagtt
atcctaaaccatacatctagtgatgagcctcttgacaaacgaggactactagaagaaaga
atgaatttaagtcgtctaaaacttgctatcaaatataaccaaaaggagtttgtctcccag
tcaaattgccagcagttcctgaacaccgtttggtttggacagatgtcaggctaccgccgt
aagcccacctgtaagaagataatgactgttttgacagttggcatcttctggccagttttg
tcactatgttatttgatagctcccaaatctcaatttggcagaatcattcacacacctttt
atgaaatttattattcatggagcatcatatttcacattcttgctgttactaaatctctac
tcacttgtctacaatgaagacaagaaaaatacaatggggccagcccttgagagaatagac
taccttctcatactgtggattattgggatgatttggtcggacattaagagactctggtat
gaagggttagaagactttttagaagaatcacgcaaccagctcagctttgtcatgaattcc
ctctacctggcaacctttgccctcaaagtggtagctcacaacaagtttcatgactttgct
gaccggaaggactgggatgcattccaccccacacttgtagcagaagggctttttgcattt
gcaaatgtcctgagttaccttcgactcttttttatgtatacaaccagctctattttgggt
ccactgcagatttcaatgggacagatgttacaagattttgggaaatttctggggatgttc
cttcttgttctgttttccttcacaattggactgacacaactctatgacaaggggtacact
cccaaagagcagaaggactgtgttggcatcttctgtgaacaacaaagcaatgataccttc
cactcgttcattggtacctgctttgctttgttctggtacatcttctccttagcacatgtg
gccatctttgtcacaaggtttagctatggagatgagctgcagtccttcgttggagctgtg
attgttggaacatacaacgtcgtggttgtgattgtgcttacgaagctgctggtagccatg
cttcacaaaagctttcagttgatagcaaatcatgaggataaagaatggaagtttgctcga
gcaaagctatggcttagctactttgatgacaaatgcacactgcccccacctttcaacatt
gttccttcaccaaagactatctgctatatgatcagtagcctcagtaagtgggtttgctct
catacatcgaaaggcaaggtcaaaaggcagaacagtttgaaggagtggagaaacttgaaa
caaaagagagatgagaactaccagaaagtgatgtgctgcctcgtgcaccgttacttgacg
tctatgcgacagaagatgcagagtacagaccaggcaacggtggagaatctcaatgaactg
cgccaagacctgtcaaaattccgaaatgaaataagggatttgcttggctttcggacttct
aaatatgctatgttttatccacgaaattaa
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