Phodopus roborovskii (desert hamster): 127238885
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Entry
127238885 CDS
T08852
Symbol
Psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B
KO
K03063
26S proteasome regulatory subunit T3
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03050
Proteasome
prob05010
Alzheimer disease
prob05012
Parkinson disease
prob05014
Amyotrophic lateral sclerosis
prob05016
Huntington disease
prob05017
Spinocerebellar ataxia
prob05020
Prion disease
prob05022
Pathways of neurodegeneration - multiple diseases
prob05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
127238885 (Psmc4)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
127238885 (Psmc4)
09164 Neurodegenerative disease
05010 Alzheimer disease
127238885 (Psmc4)
05012 Parkinson disease
127238885 (Psmc4)
05014 Amyotrophic lateral sclerosis
127238885 (Psmc4)
05016 Huntington disease
127238885 (Psmc4)
05017 Spinocerebellar ataxia
127238885 (Psmc4)
05020 Prion disease
127238885 (Psmc4)
05022 Pathways of neurodegeneration - multiple diseases
127238885 (Psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
prob03051
]
127238885 (Psmc4)
Proteasome [BR:
prob03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
127238885 (Psmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_lid_3
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
ATPase_2
NTPase_1
NACHT
AAA_3
IstB_IS21
TsaE
AAA_7
AAA_18
AAA_33
Parvo_NS1
AAA_lid_PRS2_C
AAA_17
NB-ARC
AAA_24
AAA_25
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
127238885
NCBI-ProteinID:
XP_051063614
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MRRTSASVSGSRDWPGCTEAGLVTMEEIGILVEKVQDETPALSVSRPQTGLSFLGPEPED
LEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAV
DQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTS
DQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLA
KAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFD
AQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP
DRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLA
KDFEKAYKTVIKKDEQEHEFYK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaggacttccgctagcgtcagcggaagccgtgactggccgggctgcacggaggcc
ggcttggtcactatggaggagataggcattttggtggagaaggttcaggatgagacccca
gcactgtctgtatctcggccccagactggcctgtcctttttggggcccgaacctgaggac
ttggaggacctgtacagccgctacaagaaactgcagcaagagctggagttcctggaggta
caggaggagtatatcaaggacgagcagaagaatctgaagaaagaattcctgcacgcacag
gaggaggtgaagcgaatccagagcattccgctggtcattggtcagtttttggaggctgtg
gatcaaaacacggccatagtgggctctaccacaggctctaattactatgtgcgcatccta
agtaccattgaccgggaactgctcaagcccaatgcctcggtggctctgcacaaacacagc
aacgcgctggtggatgtactgcctcctgaggccgacagcagcatcatgatgctcacctca
gaccagaagccagatgtgatgtacgcggatatcggaggcatggacatccagaagcaggaa
gtgcgggaggcggtggagctcccactcacgcacttcgagctctacaagcagattggcatc
gaccctccccggggtgtcctcatgtatggtccacctggctgtgggaagacaatgctggca
aaggctgtggcacatcatacgacagctgcatttatccgtgtggtgggctcagagtttgta
cagaagtacctgggtgagggcccccgaatggtccgggatgtgttccgcctggctaaggag
aatgcacctgccatcatcttcatagatgaaattgatgccattgccaccaagagatttgat
gcccagacaggagctgacagggaggttcagaggatcctgctggagctgctgaatcaaatg
gatggatttgaccaaaacgtcaacgtgaaggtaatcatggccacaaacagagcagacacc
ttggatccggctctactgcggccaggacgcctggaccgaaaaattgaattcccactccct
gaccgtcgccagaagaggttgattttttctaccatcaccagcaagatgaacctctctgag
gaggtagacctggaagactatgtggcccggccagataagatttcaggggccgacatcaac
tccatctgtcaggagagtggaatgttggctgtccgtgagaaccgctacatcgtcctggcc
aaggacttcgagaaagcctacaagactgtgatcaagaaagatgagcaggaacatgagttc
tacaagtga
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