Phodopus roborovskii (desert hamster): 127238947
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Entry
127238947 CDS
T08852
Symbol
U2af2
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127238947 (U2af2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prob03041
]
127238947 (U2af2)
Spliceosome [BR:
prob03041
]
Complex A
U2 snRNP components
U2 related factors
127238947 (U2af2)
Complex B
127238947 (U2af2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
127238947
NCBI-ProteinID:
XP_051063688
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MSDFDEFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRR
RSKPLTRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIPATA
LLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQ
APGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSE
NPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSK
GYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLVSLPSTINQTPVTLQV
PGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP
VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDFW
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcgacgagttcgagcggcagctcaacgagaacaaacaagaacgggacaag
gagaaccggcaccggaagcgtagccacagccgctctcgaagccgggaccgtaaacgtagg
agccgaagtcgagatcggcgtaaccgtgaccagcgcagtgcctctcgggacaggagaagg
cgaagcaaacctttgaccagaggcgctaaagaggagcacggtggattgattcgttccccc
cgccatgagaagaagaagaaggtgcgtaaatactgggacgtgccaccacctggctttgag
cacatcaccccaatgcagtacaaggccatgcaagctgcgggtcagatcccagccactgcc
cttctccccaccatgacccctgatggtctggctgtgaccccaacgccggtgcctgtggtt
gggagccagatgaccagacaggccagacgtctctacgtgggcaatatcccttttggcatc
actgaggaggcaatgatggacttcttcaacgcccagatgcgcttgggggggttgactcag
gcccctggcaacccagtcctggctgtgcagataaatcaagataagaactttgcctttttg
gagttccgttcagtggatgagacgacccaggccatggcctttgatggcatcatcttccag
ggccagtcattgaagattcgaaggccccatgactaccagccactgcctggcatgtcagag
aatccctctgtttatgtgcctggagttgtgtccactgtagtcccagactctgcccacaag
ctgttcatcgggggcctgcccaactacctgaatgatgaccaggtgaaggagctgttgaca
tcctttgggcctctgaaagccttcaacctggtcaaggatagtgccacagggctctccaag
ggctatgccttctgtgagtacgtggacatcaacgtcacagatcaggccattgcggggctg
aatggaatgcagctaggggataagaagctgcttgtccagagggcgagtgtgggagccaag
aatgccacgctggtgagcctcccgagtaccatcaatcagacacctgtgacccttcaagtc
ccaggcctgatgagctctcaggtgcagatgggcggtcacccgactgaggtcctatgcctc
atgaacatggtgctgcctgaggagctgttggacgatgaggagtatgaagagattgtagag
gatgtacgagacgagtgcagcaaatacgggctggtgaagtccattgagatcccccggccc
gtggacggcgtcgaggtgcctggctgtggaaagatctttgtggagttcacctccgtgttt
gactgccagaaagccatgcagggcctaaccggccgcaagttcgccaacagagtggtggtc
acaaagtactgtgaccctgactcttaccaccgccgggacttctggtag
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