Phodopus roborovskii (desert hamster): 127238952
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Entry
127238952 CDS
T08852
Symbol
Cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127238952 (Cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127238952 (Cnot3)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127238952 (Cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127238952 (Cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
127238952
NCBI-ProteinID:
XP_051063697
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAVPPTYPSGPPSATSALSSAPGNNGASTPAAPPSALGPKASP
APSHNSGTPAPYAQAVAPPNASGPSTAQPRPPSAQPSGGSGGGSGGSSSNSNSGTGGGAG
KQNGATSYSAVVADSPAEVALSSSAGSSASSQALGPASGPHNPAPITSKESSTAASTGAG
NVASGSGNNSGGPSLLVPLPVNPPSSPTPSFSEAKAAGTLLNGPPQFSATPEIKAPEPLS
SLKSMAERAAISSGIEDPVPTLHLTERDIILSSTSAPPTSAQPPLQLSEVNIPLSLGVCP
LGPVSLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVE
FYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQ
GTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgaa
ggcgtggagcagtttgaagatatttggcaaaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtagcatccaacgagatcaaggacaaaaggcagctcatcgaaaat
cgcaagctcattgaaacgcaaatggaacggttcaaagtcgtggaacgagagaccaaaacc
aaagcttatagcaaggagggcctaggcctggctcagaaggtggaccctgcccagaaggag
aaagaagaggttggccagtggcttacaaacaccattgacaccctaaatatgcaggtggac
cagtttgagagtgaggtggagtcactgtccgtacagacacgcaagaagaagggcgacaag
gatcagaagcaggaccggattgagggcttgaagcggcacatcgagaagcaccgctaccac
gtccgcatgctggagaccatcctgcgcatgctggataatgactccatcctggttgacgcc
atccgaaagatcaaggatgacgtggaatactacgttgactcatcccaggaccctgacttt
gaagagaacgaattcctctatgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccacccagccacagccacatggaggatgagatcttcaaccagtccagcagc
acgcccacctcaacaacttccagctctcccatcccacccagcccagctaactgcactacg
gaaaactctgaggatgataagaagagaggccgctcaacagacagtgaagtcagtcagtct
ccagccaaaaacggctccaagcctgtccacagcaaccagcacccccagtccccggctgtg
ccgcccacctacccctctggccccccatctgccacttctgccttgagctccgcccctggc
aacaatggggcctctaccccagcagcacctccaagtgccctgggccccaaggccagtcca
gctcccagccacaactcgggtactcctgccccctatgcccaggctgtggccccacccaat
gccagcgggcccagcactgcccagccccggccccccagtgcccagccgagcgggggaagt
ggtggtggcagcggagggagcagcagcaatagtaacagtggcacaggcggaggggctggc
aagcagaacggtgccaccagctacagtgcggttgttgcagacagccctgcagaggtggcg
ctgagcagcagtgcgggcagcagtgccagcagccaggccctggggcccgcctctggccct
cacaacccagctcccatcacctcaaaagaatccagtacggcagcctcaacgggggctggg
aatgtggcttcaggctcagggaacaactcagggggacccagcctcttggtgccactgcct
gtgaatccccccagttctccaacgcccagcttcagtgaggccaaggcagctggcaccctg
ctcaatggtcctccacagttcagcgccaccccagagatcaaggcccctgaaccgctgagc
tctctgaaatccatggcagaacgggcagctatcagctctggtattgaggaccctgtgcca
acgttacacctaacagagcgagacatcatcctgagcagcacatcagcaccccccacctca
gcccagccacccctgcagctgtcagaggtgaacataccattgtcactgggcgtctgtcca
ctcgggccagtgtccctcaccaaggagcagctctaccagcaggccatggaagaggccgcc
tggcaccacatgccccacccctctgactccgagcgcattcggcagtacctcccccggaac
ccttgcccgacgcccccctaccaccaccagatgccacccccacactcggacaccgtggag
ttctaccagcgcctgtcaactgagacactcttcttcatcttctactatctggagggaacc
aaggcacagtacttggcagccaaggccctgaagaagcagtcctggcgcttccacaccaag
tacatgatgtggttccagaggcacgaggagcccaagaccatcacagatgagtttgagcag
ggcacctacatctactttgactacgagaagtggggccagcggaagaaggaaggcttcacc
tttgagtaccgctacctggaggaccgggacctccagtga
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