KEGG   Phodopus roborovskii (desert hamster): 127239125
Entry
127239125         CDS       T08852                                 
Symbol
Ybx3
Name
(RefSeq) Y-box-binding protein 3 isoform X1
  KO
K06099  cold shock domain protein A
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob04530  Tight junction
Brite
KEGG Orthology (KO) [BR:prob00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    127239125 (Ybx3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:prob03000]
    127239125 (Ybx3)
   03041 Spliceosome [BR:prob03041]
    127239125 (Ybx3)
Transcription factors [BR:prob03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, DbpA-like
    127239125 (Ybx3)
Spliceosome [BR:prob03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    127239125 (Ybx3)
SSDB
Motif
Pfam: CSD OB_RNB S1CSD-TOTE-2
Other DBs
NCBI-GeneID: 127239125
NCBI-ProteinID: XP_051063875
UniProt: A0AAV0A9D3
LinkDB
Position
Unknown
AA seq 361 aa
MSEAGEATTGGTTLPQAAADAPAAAPPDPAPKSPAAGGAPQAPAPAALLAGSPGGDAAPG
PAPASSAPAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNP
RKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYYGRRRGP
PRNYAGEEEEEGSGSSEGFEPPATDGQFSGARNQLRRPQYRPPYRQRRFPPYHVGQTFDR
RSRVFPHPNRMQAGEIGEMKDGVPEGAQLQVHRNPTYRPRFRRGPARPRPAPAIGEAEDK
ENQQAANGPNQPSARRGFRRPYNYRRRPRPLNTVSQDGKETKAGEAPTENRAPAAEQSSA
E
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgagcgaggcgggcgaggccaccaccggcggcaccacgctcccgcaggccgcggccgac
gcgcccgccgcggcgcccccggaccccgcgcccaagagcccggcggccggcggcgcgccc
caggccccggcgcccgccgcgctgctcgcggggagccccggcggagacgcggcccccggg
ccggccccggcctcgtcagcccccgcgggcagcgaggacgcggagaagaaagttctcgcc
accaaagtccttggcactgtcaaatggttcaacgtcagaaatggatatggatttataaat
cgaaatgacaccaaagaagatgtgtttgtacaccagaccgccatcaagaagaataatcca
cgcaagtatcttcgcagtgtgggagatggagagactgtagagtttgatgtggttgaaggg
gaaaagggtgctgaagcagcaaatgtcactggtcccgatggagttcctgtagaagggagc
cgttacgctgctgatcggcgccgttacaggcgtggctactatggcagacgccgtggacct
ccccgtaattacgctggggaggaggaggaggaagggagcggcagcagtgaaggatttgag
ccccctgccacagatgggcagttctctggggccaggaatcagctgcgccgcccccagtat
cgccctccgtaccggcagcggcgtttcccgccttaccacgtgggacagacctttgaccgc
cgctcacgggtctttccccatcccaacagaatgcaggctggtgagattggagagatgaaa
gatggagtccccgagggagcacagctccaggttcatcggaatccaacttaccgcccaagg
ttccgcaggggacctgctcgcccacgacctgcccctgctattggagaggctgaagataaa
gagaatcagcaagcggccaatggtccgaaccagccgtctgctcgccgtggatttcggcgc
ccctacaactatcgccgccgcccccgccccctgaatactgtttcacaagatggcaaagag
accaaggcaggtgaagcaccaactgagaaccgcgctccagccgccgagcagagcagtgcc
gagtga

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