Prosthecochloris sp. CIB 2401: Ptc2401_00490
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Entry
Ptc2401_00490 CDS
T04424
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
proc
Prosthecochloris sp. CIB 2401
Pathway
proc03420
Nucleotide excision repair
proc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
proc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ptc2401_00490 (pcrA)
03430 Mismatch repair
Ptc2401_00490 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
proc03400
]
Ptc2401_00490 (pcrA)
Enzymes [BR:
proc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ptc2401_00490 (pcrA)
DNA repair and recombination proteins [BR:
proc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ptc2401_00490 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Ptc2401_00490 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_14
AAA_11
DEAD
AAA_12
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ANT64289
UniProt:
A0A1B1Q0C7
LinkDB
All DBs
Position
524705..526897
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AA seq
730 aa
AA seq
DB search
MSDIFQQLSGVQRDAVQTTEGPVMVLAGAGSGKTRVITYRIANLIESRNAAPHQILALTF
TNKAANEMRQRVEQLLYQGSTRGLWIGTFHSVFARILRNYIHLIGYTSNFSIYDSDDSKS
LIRQVMKDLGISTDSVAPNTVQSLISRAKNDFVLPAQFHRDAADYNRGKAAKVYEVYTQR
LKENNALDFDDLLLKPLELFREVPAVLEQLQEYFRYILIDEYQDTNKAQYLVAKQLCARH
RNIFVVGDDAQSIYSWRGADISNILNFTDDYPDAKVFKLLENYRSTRTILRAANGVISRN
SRQIRKDLVSNKGDGEPLSLLESFNEKREADKVGEMIRSLKLSQQREYRDFAIFYRTNAQ
SRVLEDILRMHRIPYRIFGSISFYKRKEIKDAIAYLRFIQNDQDTESLLRIINFPPRKIG
DKSIQQLTEYSRVRGTSLYEAIKVAESGGFQARLLNALGAFSDLVEKLKLVALEGSVYDV
LNSLYEETGLLRLLKEENTAESLARHENLQELLSMAREFSDHHQGANGLCEFMNDIALAS
DREAAEETDNYVSLMTVHAAKGLEFPVVFITGLEERLFPLNCFENEELEEERRLFYVAVT
RAREKLFLSWSKSRYLYGQPQACIRSMFIDEIDSDIIENEGGSTLSESRVPRQMSNGRPC
VPQVPPGPTKRPAGPQDGLKKGVRVQHAMFGPGVVRRVQGSGSSRKVVITFRNSGDKTLM
VEYANLKIMP
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgatattttccagcagctgagcggtgtgcagcgtgatgctgtccagacaacagag
ggaccggtcatggtgcttgccggtgccggatccggcaagacaagggtgattacctacagg
atcgccaaccttatcgagagccgcaatgcggctcctcaccagatcctggcacttaccttt
accaacaaagccgccaacgagatgcgccagagggtagagcagttgctctaccagggtagc
actcgtggattgtggataggtaccttccactctgtttttgccagaatcctgcgcaattac
attcacctgatcggctatacgtccaacttttcgatttacgattcggatgacagcaagagc
ctgatcaggcaggtgatgaaggatctcgggatttctaccgattccgtcgcgccgaatacg
gtgcagtctcttatcagcagggcgaaaaacgattttgtgctgccggcccagttccaccgc
gatgcggctgactacaacagagggaaggctgcaaaagtctacgaggtatatacacagcgc
ctcaaggaaaacaatgccctggatttcgacgaccttcttctaaagcccctggagctgttc
cgcgaagtaccggcggtgctcgagcagctgcaggagtattttcgttacattctcattgac
gagtaccaggataccaacaaggcgcagtaccttgtagccaaacagctttgcgcgcgtcat
cgcaatattttcgtggttggtgacgatgcgcagtcgatatattcctggagaggtgccgat
atttcgaatatcctcaattttactgatgattatccagatgccaaggtgttcaagctgctc
gagaattaccggagtacacgtactatcctgcgtgctgcaaatggcgtgatcagccgtaac
agtcggcagatcaggaaggatcttgtttccaacaagggtgatggggagccattgagcctg
ctcgagtcgttcaatgaaaagcgggaggctgacaaggtgggggagatgatccgttcactg
aagctttctcagcagcgggagtatcgtgattttgcgattttttaccgtactaacgcccag
tcgagggtgctcgaggatattctgcgcatgcacaggattccttacaggatttttggcagc
atatcgttctacaagcgcaaggagatcaaggatgcgatagcttaccttcgttttatccag
aacgatcaggataccgagtcgctgcttcgcatcatcaattttcctccccgtaaaattggc
gataaaagcattcagcagcttacggaatattcgcgtgtgcggggcacgtcgctgtatgag
gcgatcaaggttgctgaatcgggcggtttccaggcccggcttctcaatgctctcggtgcg
ttcagcgatcttgtagagaagctcaagctggttgccctggaggggtcggtctatgatgtg
ctcaatagtctctatgaagagaccggcctcctgcggttgctcaaggaggaaaataccgcc
gagtctcttgccaggcatgagaatctccaggagcttctgtcgatggcgagggagttttca
gaccatcaccagggagctaacggactttgcgagttcatgaatgatatcgccctggccagt
gaccgcgaggcggctgaagaaacggataactatgtgtcgctgatgacggtgcatgccgct
aagggcctggagtttccggttgtgttcattacgggactcgaggagcgcctttttcccctc
aactgcttcgagaacgaagagctcgaggaggagcgtcgccttttttatgtcgccgtgacc
agggcccgggaaaaactctttctttcgtggtcgaagagccggtatctctatggccagccg
caggcctgtatccgatccatgttcatcgatgagatcgatagcgacattatcgagaacgag
ggtggcagtacgctgtccgaatccagggtgccccgccagatgtccaatggcaggccctgt
gttccccaggttccgcctgggccgacgaaaaggcctgcagggccgcaggatggcctgaaa
aaaggagttcgtgtgcagcatgccatgttcggacccggagtggtcaggagggtccaggga
agcggttcgtcgaggaaggtagtcatcacgtttcgtaattccggggacaagactctgatg
gtggaatatgcgaacctgaaaattatgccgtag
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