Prosthecochloris sp. CIB 2401: Ptc2401_01012
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Entry
Ptc2401_01012 CDS
T04424
Symbol
gcdB
Name
(GenBank) Glutaconyl-CoA decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
proc
Prosthecochloris sp. CIB 2401
Pathway
proc00620
Pyruvate metabolism
proc00650
Butanoate metabolism
proc01100
Metabolic pathways
proc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
proc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Ptc2401_01012 (gcdB)
00650 Butanoate metabolism
Ptc2401_01012 (gcdB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Ptc2401_01012 (gcdB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
proc02000
]
Ptc2401_01012 (gcdB)
Enzymes [BR:
proc01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
Ptc2401_01012 (gcdB)
Transporters [BR:
proc02000
]
Other transporters
Primary active transporters [TC:
3
]
Ptc2401_01012 (gcdB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OAD_beta
ATP-synt_ab_Xtn
NQRA_N
Motif
Other DBs
NCBI-ProteinID:
ANT64790
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All DBs
Position
1018170..1019732
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AA seq
520 aa
AA seq
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MNSLRTFIVALLALCCFSAAAQASDGFIHTDGDVVSLTVPEDMELVKVPVRDSRTLRIGD
DIHAGDFLGLFADKAHHKITITSGVTGHISYIHPSLYSKYTHVPAGTVLLRISEQSLLVS
STGDVEAADRLSIGKVFINLVQSTGIYALISDNSLTWTEGLGRLLMITVGALLIYLGIAK
GFEPLLLIPIGMGAVLSNIPLAYINDEGGVLRYVYDIGIETGVFPLIIFMGVGAMTDFGP
MIANPKTAFLGAAAQFGIFMTLIGALLLSQYVPGIGFTMKDAASIGIIGGADGPTSIFLA
SRLSPHLLGSIAVAAYSYMALVPIIQPPIMKLFTTEAERKIKMTQLRYVSKREKILFPVI
VIILCALLLPSAAPLIGFLMFGNLMKECGVVERLSDTTQNALINIVTIFLGLGVGSKLSA
EKFLNLETLGIIVLGLIAFSFGTASGVIMAKTMNLFLKQKINPLIGSAGVSAVPMAARVS
NKVGLESDPHNFLLMHAMGPNVAGVIGSAVAAGILLSVFL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaattctctacgtaccttcatagtcgccctgcttgcgctctgctgtttttcagctgct
gcgcaggcatcggatggatttatccacaccgatggcgatgtggtgtccctgacggtgccg
gaagatatggaacttgtcaaggttcctgtccgtgacagccgcactctccgcattggtgac
gatatccatgccggggactttctaggcctttttgctgataaggctcatcataaaatcacc
atcacatccggggtgacaggccatatttcctatatccacccctcgctctattctaagtat
acccatgttccggcaggaactgttctgcttcgtatttccgagcaatcgctcctggtcagt
tccacaggtgatgtagaggcggctgacaggctgtccatcgggaaggtgtttatcaacctc
gtacagagcactggtatctatgcgctcatatcggataacagtctgacctggactgaaggg
cttggacgattgctgatgattaccgtaggagccctgttgatctatcttgggatcgctaaa
gggttcgagccgctgctgctgattccgattggcatgggcgcagtgctttccaacattcca
ctggcctatatcaatgacgagggcggtgttttgcgttatgtctacgatataggtatagaa
accggcgtgttcccacttatcattttcatgggcgttggtgctatgaccgacttcggtccc
atgatcgccaatcccaaaactgcgtttcttggagcagctgcgcagtttggcattttcatg
acactgatcggggctcttctgctttcgcagtatgtgcctgggattggttttaccatgaag
gatgcggcttcgatcggtattattggtggcgctgacggtccgacttcgattttcctcgca
tcccgcctcagtcctcacttgctggggagtatagctgttgcggcttattcctatatggcg
ctggtgccgatcatccagccgccgatcatgaagctctttaccaccgaagccgagcgcaag
atcaagatgacacagcttcgttacgtatcgaagcgggagaagattctttttccggttatc
gtcatcatcctctgcgcattgctgcttccttccgcagcaccccttatcgggttcctgatg
ttcggtaacctgatgaaggagtgtggtgtggtcgagcgcctgagcgatactacccagaac
gcccttatcaacatcgtgacgatctttctgggcctcggagtaggtagcaagctttcagca
gagaagttcctcaatctcgagactctcggaatcatcgtccttggactgatcgcgttctcg
ttcggtacggcgtctggtgtgatcatggcaaagaccatgaaccttttcctcaagcagaag
atcaatccgcttatagggtcggctggagtatcggcagttccaatggctgcaagggtatcc
aacaaggtcggcctggaatcagatccgcacaactttctgctcatgcacgccatgggacct
aacgttgctggtgtgatcggttcagctgtggctgcaggtattctgctctcggtgttcttg
tag
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