Prosthecochloris sp. CIB 2401: Ptc2401_01089
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Entry
Ptc2401_01089 CDS
T04424
Symbol
polC_1
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
proc
Prosthecochloris sp. CIB 2401
Pathway
proc03030
DNA replication
proc03430
Mismatch repair
proc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
proc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ptc2401_01089 (polC_1)
03430 Mismatch repair
Ptc2401_01089 (polC_1)
03440 Homologous recombination
Ptc2401_01089 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
proc03032
]
Ptc2401_01089 (polC_1)
03400 DNA repair and recombination proteins [BR:
proc03400
]
Ptc2401_01089 (polC_1)
Enzymes [BR:
proc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ptc2401_01089 (polC_1)
DNA replication proteins [BR:
proc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ptc2401_01089 (polC_1)
DNA repair and recombination proteins [BR:
proc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ptc2401_01089 (polC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
CAF1
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ANT64863
LinkDB
All DBs
Position
1113655..1114353
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AA seq
232 aa
AA seq
DB search
MIRSIEKVLAEYRCRKGTLRSEVCDYLRAFRRKDYLDTHVDEARFVVFDTETTGFDTSRD
SVISIGAVAINQGRISIDDSMELLVRRASIGDREAAAVHGLLSRDLSDGCDEAEAALAFL
VYCGRSVLVAQHASFDILMMNRILQRHFGIRLMNDVVDTASLAKRLEKGPYYNLAHKSGE
YRLDNLLLRYRIRLHDRHTAAGDAFLTAQLFQRLVSKGKECGILTVRDLLLR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtgattagaagtatcgagaaggtgttggcggaataccgctgcaggaagggaacacttcgt
agtgaggtgtgtgactaccttagggcgttcaggcgtaaagactatctggatacccacgtt
gatgaagcccgttttgtggtattcgatacggaaacgacagggttcgatacctctagggat
agcgtgatttcaatcggtgccgtagccatcaaccaaggcaggatctcgattgatgattca
atggagctgcttgtacgccgtgcctctatcggggatcgagaggctgctgcggtacatggt
cttctcagtcgggacctttcggacggctgtgacgaagctgaggctgcacttgcgtttctt
gtctattgcgggcggagtgtgcttgtagcgcagcatgcgtcattcgatatcctgatgatg
aaccgtatcctgcagcgccatttcggaatacggctgatgaacgatgtggtcgatacggca
agcctggccaagcggcttgaaaaaggcccctattacaaccttgcgcataagagcggtgag
taccggcttgacaatctcctcctgaggtatcgtatccgtttgcatgaccgccatacagct
gccggcgatgccttcctgacggcacagctgttccagcgcctggtcagcaaggggaaggag
tgcgggatactgacggtcagggacctgttgctgcgatga
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