Prosthecochloris sp. CIB 2401: Ptc2401_01207
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Entry
Ptc2401_01207 CDS
T04424
Symbol
rpoN2
Name
(GenBank) RNA polymerase sigma-54 factor 2
KO
K03092
RNA polymerase sigma-54 factor
Organism
proc
Prosthecochloris sp. CIB 2401
Pathway
proc02020
Two-component system
proc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
proc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ptc2401_01207 (rpoN2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Ptc2401_01207 (rpoN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
proc03021
]
Ptc2401_01207 (rpoN2)
Transcription machinery [BR:
proc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ptc2401_01207 (rpoN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LacI
DNA_pol_alpha_N
Motif
Other DBs
NCBI-ProteinID:
ANT64980
LinkDB
All DBs
Position
complement(1234725..1236149)
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AA seq
474 aa
AA seq
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MSELKLQQSQRAQLSLQQILSSQLLQLPLQRLEQRIYQELQENPMLELVEETKEAQVADD
PGSDTVDDGQDEGEMFDVLERFNKDREGVLHFTMDNAPREHFVQAVQRDSVEEDMLREFS
LLEEITPEELLIAAEVLGNLDNDGYFLEEPEVVMVGVEREHDVEVSLGDVERVRQRLVTM
DPPGVAACNLQERLLVQLAKKASAASGQPEKLAGRVLRDYFDDFVNNRFDRISKKLDLES
EELEPVIRVIAGLDRHPFVVSGGDERYILPDFIVTYDDGRLTASLNDRSNMTVQVTGQYS
EILKNRSIPREDRQFMRQKLNRAREFTSAIEQRRHTLIKVIETLMAFQYRFFVSGPAHLV
PLGMKDVAEKSGFDLSTISRAVNGKYVQTRFGTFELKYFFSGSMTTDGGDELSTRIIKGY
LKEIIEKENARKPLSDGKIAEMIEAKGVQIARRTVAKYREQMQIPVARLRKKIF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaactgaagctacaacaatcccagagggctcaactctcccttcagcagattctg
tccagccagctgctgcagttgccactgcagcgtctggagcagaggatctatcaggaactc
caggaaaatcctatgctggaactggttgaggagaccaaagaagcccaggtggcagatgat
ccgggttcggatacggttgacgacgggcaggatgagggcgagatgttcgatgtgcttgag
cgtttcaacaaggatcgggaaggggttctccattttacgatggacaatgcacccagggaa
catttcgtgcaggcggtgcagcgtgactcggtagaagaggatatgttgcgggagttttcc
ctgctggaggaaatcacgcctgaggagctgctgattgctgcagaggtgctggggaatctc
gataacgacggctatttcctcgaggaaccggaggtggtgatggttggtgtggagcgtgaa
catgatgtcgaggtgagcctcggggatgtagaacgtgtacgacagcgcctggttacgatg
gaccctcccggagttgctgcatgtaacctgcaggaacgtctgctggtgcagctggcaaaa
aaggcttccgctgcatcgggtcaacctgaaaagcttgccgggagggtgcttcgggattat
ttcgacgattttgtcaataaccgtttcgacaggatttcgaagaagctggacctggaatct
gaagagctcgagccggtcatcagggttatcgcagggctggaccgccatccgtttgtagtc
tctggaggggatgaacggtatattttgcccgattttatagtgacttacgatgacgggcgg
cttacggcatcgctcaatgaccgcagcaacatgacggtacaggttaccgggcagtacagt
gaaatcctgaaaaaccggtcgattccaagggaagatcggcagtttatgcgccagaaactc
aacagggcaagggaatttaccagtgccatagagcagaggcggcatacgctgataaaggtt
atagagaccctcatggcgtttcagtacaggtttttcgtgtcgggccctgcgcatcttgtt
ccccttgggatgaaggatgtggcagaaaaaagcgggttcgacctttctacgataagtcgt
gccgtaaatgggaaatatgttcagacgcgttttgggactttcgaactgaagtattttttc
agtggcagcatgacgactgatggaggcgatgagctttcgacccgtattatcaagggatat
ctgaaagagattatagagaaggagaatgccagaaaacccctcagtgatggtaaaatcgct
gaaatgatcgaggcgaaaggggttcagatagcacgacgaacggttgcaaaataccgtgaa
caaatgcaaattccagttgcaaggttaagaaaaaaaatattttaa
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