Prosthecochloris sp. CIB 2401: Ptc2401_01654
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Entry
Ptc2401_01654 CDS
T04424
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
proc
Prosthecochloris sp. CIB 2401
Pathway
proc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
proc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ptc2401_01654 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
proc03019
]
Ptc2401_01654 (groL)
03110 Chaperones and folding catalysts [BR:
proc03110
]
Ptc2401_01654 (groL)
03029 Mitochondrial biogenesis [BR:
proc03029
]
Ptc2401_01654 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
proc04147
]
Ptc2401_01654 (groL)
Enzymes [BR:
proc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Ptc2401_01654 (groL)
Messenger RNA biogenesis [BR:
proc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Ptc2401_01654 (groL)
Chaperones and folding catalysts [BR:
proc03110
]
Heat shock proteins
HSP60 / Chaperonin
Ptc2401_01654 (groL)
Mitochondrial biogenesis [BR:
proc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Ptc2401_01654 (groL)
Exosome [BR:
proc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ptc2401_01654 (groL)
Exosomal proteins of other body fluids (saliva and urine)
Ptc2401_01654 (groL)
Exosomal proteins of breast cancer cells
Ptc2401_01654 (groL)
Exosomal proteins of colorectal cancer cells
Ptc2401_01654 (groL)
Exosomal proteins of bladder cancer cells
Ptc2401_01654 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
Fe-ADH
TolA_bind_tri
Motif
Other DBs
NCBI-ProteinID:
ANT65394
LinkDB
All DBs
Position
complement(1668650..1670299)
Genome browser
AA seq
549 aa
AA seq
DB search
MTAKDILFDAEARGKLKDGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEI
ELEDPFENMGAQMVREVSSKTSDVAGDGTTTATVLAQAIYREGLKNVAAGARPIDLKRGI
DHAVKAVVAELKSFSRDITGKKEIAQVGTISANNDPEIGELIAEAMEKVGKDGVITVEEA
KGMETELTVVEGMQFDRGYLSPYFVTNSEKMEAELEDPYILIHDKKIGNMKDLLPVLEKT
AQSGRPLMIIAEDIEGEALATLVVNKLRGTLKVCAVKAPGFGDRRKAMLEDIAILTGGTV
ISEEKGYKLENATISYLGQAATITVDKDNTTIVDGKGQADDITARINEIKGQIEKSTSDY
DTEKLQERLAKLSGGVAVINIGASTEVEMKEKKARVEDALHATRAAVQEGIVAGGGVALI
RAAKALENAQPENADQTTGIDIIRRALEEPLRQIVANTGTTDGAVVVEKVKQGEGEYGFN
ARTEVYENLVEAGVVDPTKVTRTALENAASVAGLLLTTEAAITDIKEDDAGMPAMPGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaaagatattctctttgacgctgaagcccgtggcaagctcaaagacggtgtt
gacaaactggctaatgccgttaaagtaacgcttggcccagcaggccgtaacgtgcttatc
gacaaaaaattcggcgctcctacctccaccaaggacggcgttaccgtcgccaaggagatc
gagctcgaagatccgttcgagaacatgggtgcacagatggttcgcgaagtatcgtcaaaa
accagcgatgtagcaggtgacggtacaaccactgcaactgttcttgcccaggctatctac
cgtgaaggcctcaaaaacgtggcagctggtgcacgtccgatcgacctcaagaggggtatc
gatcacgcagtcaaggctgttgtagccgagctcaaaagcttcagccgcgacattaccggc
aaaaaagagatcgcccaggttggtactatttctgccaacaacgatcctgaaatcggtgaa
ctcatcgccgaggctatggaaaaagtcggtaaagatggtgtgatcaccgttgaagaggca
aaaggtatggagaccgagctcactgtcgttgaaggtatgcagttcgatcgtggctacctc
tctccgtacttcgtgaccaattccgagaaaatggaagctgagctcgaagatccttatatc
ctgatccacgacaagaagatcgggaacatgaaggacctccttcctgtgctcgagaaaacc
gcacagtcaggccgtccgctcatgatcatcgctgaggatatcgaaggcgaagcacttgct
accctcgtggtcaacaagctccgcggtaccctgaaagtctgtgcagtgaaagctcccggc
tttggcgaccgccgtaaggccatgctcgaagatatcgccattcttaccggcggtaccgtg
atctccgaggagaaaggttacaagctcgaaaacgctaccatctcctacctcggacaggct
gcaaccatcactgtcgataaagacaataccaccattgtcgacggtaaaggtcaggctgac
gatatcactgcccgtatcaacgagatcaagggccagatcgaaaaatcgacttcagactac
gataccgagaagctgcaggagcgtcttgccaagctttccggcggtgttgccgtgatcaac
atcggtgcatcgaccgaagtcgagatgaaagagaagaaagcccgcgtcgaggatgctctt
cacgctacccgcgcagctgtgcaggaaggtatcgttgccggtggcggcgttgcccttatc
cgtgcagcaaaagcgctcgaaaatgcacagcctgaaaatgccgaccagacgactggtatc
gacattatccgccgtgcgctcgaagagccgcttcgccagatcgtagccaacaccggcacc
actgatggcgctgttgttgtcgagaaggtcaaacagggtgaaggcgaatatggtttcaac
gcgaggactgaagtctacgagaacctcgttgaagcaggtgttgtcgacccgaccaaggtg
accaggactgccctcgagaatgcagcttcggttgccggtctgctcctcaccaccgaggca
gctatcaccgacatcaaggaagatgatgcaggcatgcctgcaatgccgggtggcatgggt
ggtatgggtggcatgggcggcatgatgtaa
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