Prosthecochloris sp. CIB 2401: Ptc2401_01884
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Entry
Ptc2401_01884 CDS
T04424
Symbol
hupA
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
proc
Prosthecochloris sp. CIB 2401
Brite
KEGG Orthology (KO) [BR:
proc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
proc03032
]
Ptc2401_01884 (hupA)
03036 Chromosome and associated proteins [BR:
proc03036
]
Ptc2401_01884 (hupA)
03400 DNA repair and recombination proteins [BR:
proc03400
]
Ptc2401_01884 (hupA)
DNA replication proteins [BR:
proc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Ptc2401_01884 (hupA)
Chromosome and associated proteins [BR:
proc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Ptc2401_01884 (hupA)
DNA repair and recombination proteins [BR:
proc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Ptc2401_01884 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ANT66023
LinkDB
All DBs
Position
1912498..1912806
Genome browser
AA seq
102 aa
AA seq
DB search
MGKTTTKADLVNTIAIRTGLTKHETEAVVDSLFESIIDSLKAGNRIEIRGFGSFNIRYKN
QRMARNPRTGEKVSVEAKNVPTFKISKEFKHAVSQSLKTEQE
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaacaaccaccaaagcagaccttgtcaacactatcgccatacgaaccgggttg
acaaaacatgaaaccgaagcggttgtagacagcctgttcgaaagcatcattgattcgctc
aaggcaggtaaccgtatcgaaataagaggcttcggctccttcaacatccgttacaagaac
cagcggatggcaagaaacccgagaacaggtgaaaaagtatcggttgaagctaaaaacgtg
ccgacattcaagatctccaaagagttcaagcatgcagtaagccagagtctcaaaaccgaa
caggaataa
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