Prosthecochloris sp. CIB 2401: Ptc2401_02090
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Entry
Ptc2401_02090 CDS
T04424
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
proc
Prosthecochloris sp. CIB 2401
Pathway
proc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
proc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Ptc2401_02090 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
proc03021
]
Ptc2401_02090 (rpoA)
03400 DNA repair and recombination proteins [BR:
proc03400
]
Ptc2401_02090 (rpoA)
Enzymes [BR:
proc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Ptc2401_02090 (rpoA)
Transcription machinery [BR:
proc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Ptc2401_02090 (rpoA)
DNA repair and recombination proteins [BR:
proc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Ptc2401_02090 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
ANT65820
UniProt:
A0A1B1Q4S7
LinkDB
All DBs
Position
complement(2152296..2153282)
Genome browser
AA seq
328 aa
AA seq
DB search
MIYQMQMPERIEVDETHHSEMSGRFIAQPLERGYGVTLGNAMRRVLLASLPGTAITGIKI
EGVFHEFSTIEGVREDVPEIVLNLKKVRFRSTSKRSCKTTVTLEGTADFKAGDIFAQEGE
FEVLNKDLHIATLNEHARLCIDIYIGRGRGYVPAEENRGDGMPIGFIALDSIFTPIKNVR
FSVENTRVGQRTDYEKMILDVETDGSISPDDSISLAGKIINEHVSLFADFSPAEEEFAEE
EYKQLDDEFENMRKLLLTRIEDLDLSVRSHNCLRLAEIETLGDLVSRREDELLTYKNFGK
KSLTELKEQLDKFDLKFGMDITRYQMKS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatataccagatgcagatgcctgaacggattgaagtcgacgagactcatcacagtgag
atgagcggtcgctttatcgcacagcccctcgagagggggtatggcgttaccctgggcaat
gcaatgcgtcgtgtcctccttgcttcgctgccgggtacggctattacaggtatcaagata
gaaggcgttttccacgaattttcaaccatcgagggtgtacgtgaagatgttccggagatt
gtccttaaccttaaaaaggttcggttcagatcaacatccaagcgcagctgcaagactact
gtgaccctggaaggcacggctgatttcaaggctggtgatatttttgcccaggaaggtgaa
tttgaggtgctcaacaaggatctccatatcgcgactctgaatgagcatgcaaggctctgt
atagatatctatattggtagagggcgtggctatgtcccggctgaagaaaataggggcgac
ggtatgccgattggctttattgcccttgattctatttttacgccgataaagaatgtccgg
ttctctgttgagaatacccgtgtgggtcagcggacagactatgaaaagatgatcctcgat
gtggaaaccgatggttccatttcacctgatgactccatcagccttgcaggcaagatcata
aatgagcatgtttctctctttgcggatttctcgccggcagaggaggagtttgcagaagaa
gagtacaaacagttggatgacgagttcgaaaacatgcgtaagctactgctgacgcgtatc
gaagacctcgatttgtcagtgcgctctcataactgtctcaggctggctgaaatcgaaacc
cttggagacctggtgtctcgtcgtgaggatgagctcctgacctacaagaacttcggtaag
aagtcgctgacagagctcaaggagcagttggacaagttcgatctgaagttcgggatggat
atcacccgttaccagatgaagagctga
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