Prosthecochloris sp. CIB 2401: Ptc2401_02185
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Entry
Ptc2401_02185 CDS
T04424
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
proc
Prosthecochloris sp. CIB 2401
Pathway
proc00541
Biosynthesis of various nucleotide sugars
proc01100
Metabolic pathways
proc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
proc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Ptc2401_02185 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
proc01005
]
Ptc2401_02185 (kdsA)
Enzymes [BR:
proc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Ptc2401_02185 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
proc01005
]
Lipid A
Ptc2401_02185 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Phage_L5_gp82
Asparaginase
Motif
Other DBs
NCBI-ProteinID:
ANT65914
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Position
complement(2226582..2227403)
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AA seq
273 aa
AA seq
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MEKFSIGGIRIPQDNGLFFIAGPCLIEGRDMAMEVAAELSGFARQTGVPVIFKGSFRKAN
RSSKESFTGIGDTAALEILAEVRERYGMPVLTDVHNVQDVQLASGYVDVLQIPAFLCRQT
ELLVAAGESGLAVNIKKGQFMAPEDMSLAAAKVADSGNERIMLTERGTSFGYHNLVVDFR
GVPRMARSGYSVVYDATHSLQLPSAGNGVSSGEREFLRPLARAAVAAGVDGIFAEVHPQP
SRAHSDAATQIPLGEFAGFARELQQLKTCVQSL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagttttcgataggagggattaggatccctcaggacaatggactgtttttcata
gctggtccctgcctcatcgaaggccgcgacatggccatggaagttgccgcagaactttca
ggctttgcaaggcagactggagtgcctgttattttcaaggggtcgtttcgtaaggcaaac
cgttcgtcgaaggagtcgtttaccgggatcggtgatactgctgcccttgaaatccttgct
gaggttcgggagcgttacggtatgccggtgctgacagatgtgcataatgtgcaggatgtt
cagcttgcgtctgggtatgtggatgttcttcagattccggcttttctctgccgccagaca
gagcttcttgtggcagcaggggagagtggccttgccgtcaatatcaagaaggggcagttt
atggctcctgaagatatgtcgctggctgctgcaaaggtggcagattcaggtaacgaaagg
attatgctgacagagcggggtacctcgttcgggtaccataacctggttgtcgatttcagg
ggcgtgccaaggatggcccgatcaggatattctgtggtatatgatgcgacccacagtctc
cagctgccgtctgcaggcaatggtgtgtcgagcggggagcgtgagtttttgcgtccgctt
gcacgggcggcggtcgctgccggtgtggatggtatttttgctgaagttcatccgcagcca
tccagggcgcactccgatgcggctacccagatccccctcggtgagtttgccgggtttgcc
agggagttgcagcagctcaagacctgcgtccagtcgctgtag
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