Prodigiosinella aquatilis: PCO85_00035
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Entry
PCO85_00035 CDS
T09220
Symbol
rbsA
Name
(GenBank) ribose ABC transporter ATP-binding protein RbsA
KO
K10441
ribose transport system ATP-binding protein [EC:
7.5.2.7
]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PCO85_00035 (rbsA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prod02000
]
PCO85_00035 (rbsA)
Enzymes [BR:
prod01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.7 ABC-type D-ribose transporter
PCO85_00035 (rbsA)
Transporters [BR:
prod02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
PCO85_00035 (rbsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_30
SMC_N
ABC_ATPase
TsaE
AAA_22
RsgA_GTPase
AAA_29
DUF1629
Ploopntkinase3
MMR_HSR1
AAA_15
MukB
DUF2813
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WJV53931
LinkDB
All DBs
Position
7342..8847
Genome browser
AA seq
501 aa
AA seq
DB search
MEPLLQLQGITKTFPGVKALSGAALNVYPGKVMALVGENGAGKSTMMKVLTGIYRKDAGS
IHFLGKEVDFSGPKASQEAGIGIIHQELNLIPQLTIAENIFLGREFTNRFGRIDWAQMYA
EANKLLQRLNLRYDSRRLVGDLSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETASL
FKVIKELQSHGCGIVYISHRLKEIFEICDDVTVFRDGQFIGESPVNDLQEDALIEMMVGR
KLEDQYPRLDQAPGDVRLQVTELSGPGAKNVSFSLRKGEILGVAGLMGAGRTELMKILYG
ALPRTHGSVFLDGREIITHSPQDGLVNGIVYISEDRKRDGLVLGMSVKENMSLTALRYFS
RKGGSLKHAEEQQAVSDFIRMFNIRTPTMEQTIGLLSGGNQQKVAIARGLMTRPKILILD
EPTRGVDVGAKKEIYQLINQFKQEGLSIILVSSEMPEILGISDRIIVMHEGCLSGEFPIE
QATQETLMAAAVGKQYGAKQE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggaacctttactgcaattgcaaggcatcaccaaaaccttccccggtgtgaaggcactc
tcaggcgcagccctgaatgtctatcccggtaaagtaatggcgttggtgggagaaaatggc
gccggtaagtccaccatgatgaaagtactgaccggtatctatcgtaaagatgcgggtagt
attcattttctgggcaaggaggtggatttcagcggccctaaagcatctcaggaagcgggt
atagggattattcatcaggagttaaacctgattcctcaactgacgattgcagaaaatatt
tttttgggtcgtgaatttactaatcgttttggtcgtatcgactgggcgcagatgtacgct
gaggcaaataaactgcttcagcgtcttaatctgcgttatgacagccgtcgtctggtggga
gatctctccattggtgagcaacaaatggtggagattgccaaggtattaagcttcgaatcc
aaagtcatcattatggatgaaccgaccgatgcgttgacggatactgaaacggcctcgctg
ttcaaagtgattaaagagcttcagtcccatggttgcggcattgtttacatctctcatcgc
ctgaaagaaatctttgaaatctgcgacgacgtcacggtattccgtgacggtcagtttatc
ggggagagcccggtcaatgatttacaggaagacgctcttatcgaaatgatggtgggccgc
aagttggaagatcaatatcctcggcttgatcaggcacccggtgacgtgcgcttgcaggtg
actgagctttctggtcccggcgcaaaaaatgtaagcttttcgctgcgtaaaggtgaaatt
cttggtgtagcgggattgatgggtgccggccgtaccgagttgatgaaaattctttatggc
gcattaccccgtacccacggttctgtgttccttgatgggcgtgaaattattacccattcg
ccacaagatgggttggtaaatgggatcgtctacatttctgaagaccgcaaacgtgatggt
ttggtgttaggcatgtcggtgaaagagaatatgtcgttgacggcattacgttactttagc
cgaaaaggtggttcactcaagcatgccgaggaacaacaggcggtcagtgattttatccgg
atgttcaatattcgtacgccgacaatggagcagactatcggtctgttgtccggtggtaac
cagcagaaggtcgccattgcccgtggtttgatgacgcgaccgaaaatcttgatccttgat
gaaccaacccgcggtgtggatgttggggcaaagaaggagatctatcagctaatcaatcaa
ttcaaacaagaagggctgagtatcattctggtgtcatcggaaatgcctgaaattttaggt
attagcgatcgcattattgttatgcatgaaggctgcctgagcggtgaattcccgattgag
caagctacccaggaaacgctgatggctgcggctgttggtaagcaatacggcgcaaagcag
gagtaa
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