Prodigiosinella aquatilis: PCO85_01440
Help
Entry
PCO85_01440 CDS
T09220
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod00730
Thiamine metabolism
prod01100
Metabolic pathways
prod01240
Biosynthesis of cofactors
Module
prod_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PCO85_01440 (thiC)
Enzymes [BR:
prod01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PCO85_01440 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
WJV54178
LinkDB
All DBs
Position
complement(313008..314939)
Genome browser
AA seq
643 aa
AA seq
DB search
MSTEKKAPGRREQRAAAQQFIDTLRGTAFPNSQRIYISGSREDIRVPMREIQLSPTLTGG
SRENPCHEPNEPVPVYDTAGPYGDPAATPDVHLGLEKVRAAWIAERNDTQALSQVSSGFT
QQRLADAGLDHLRFEQLPQPQCAKTGKRVTQLHYARQGIVTPEMEFIAIRENMGRERIRS
KVLRQQHPGQSFGANLPDSITPEFVRQEVAAGRAIIPANINHPESEPMIIGRNFLVKVNA
NIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQ
ALEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSI
MAKWCLSHHKENFLYQHFREICELCAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGE
LTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTS
GIGAAMIGWFGCAMLCYVTPKEHLGLPNKDDVKQGLITYKIAAHAADLAKGHPGAQIRDN
AMSKARFEFRWDDQFNLALDPQTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVR
DYAAQQEAVAQPIDVGMAQMSAEFRARGSELYHTATSLPQEES
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaaaagaaagcacctggtcgtcgtgagcaacgcgccgccgcccaacagttt
attgacacccttcggggtaccgcattcccgaattcacagcgaatttacatttctggctca
cgcgaagatatccgtgttcccatgcgggaaattcagctcagccccaccttgactggtggt
agccgggagaatccctgccatgaacccaacgagcccgtccccgtctatgatacggctggc
ccatatggcgatcctgccgctacaccagacgttcacctcggcctggaaaaagtccgggcc
gcctggatagccgagcgcaacgatacacaagcgctttctcaggtcagttctggttttacc
cagcaacgcttggccgatgcaggattggatcatctgcggtttgaacaattgccgcaaccg
cagtgtgccaaaaccggcaagcgggtaacgcaactgcattatgctcgtcaggggatcgtc
acacctgaaatggaattcattgccatccgtgaaaatatggggcgtgaacgtatccgcagt
aaggtgctgcgccagcaacaccctggccaaagcttcggtgccaacttgcccgacagtatc
accccggaatttgtacgtcaggaagttgccgccggacgcgccattattcccgccaatatc
aatcatcccgagtcagaaccgatgattatcggccgtaattttctggtgaaggtcaatgcc
aatatcggtaactccgccgtgacatcgtccatcgaagaagaagtggaaaagctggtgtgg
tcaacgcgctggggtgcggataccgtgatggatttgtccaccggacgttatattcatgaa
acccgcgagtggatactacgtaacagcccggttcccattggtacggtacctatttatcaa
gctctggaaaaagttaatggcgttgcggaaaatctgacctgggaaatgttccgcgacaca
ttgctggaacaggcagaacaaggcgttgactatttcaccatccatgctggggtgctgctg
cgctacgtgccgatgaccgccaaacgcctgacgggcattgtctctcgcggtggctccatc
atggcgaaatggtgtctttctcatcataaagaaaatttcctgtatcagcactttcgtgaa
atttgtgaactctgtgcagcctatgatgtatccctgtcattgggtgatggtcttcgccct
ggctctattcaggacgccaacgatgaagcccagttcgccgagctccacacgctgggtgag
ctgaccaaaatcgcctgggaatatgacgttcaggtcatgattgaaggccccggtcatgtg
ccgatgcaaatgatccgccgcaacatgactgaagagctggagcattgccatgaagcgccg
ttctacacgctcggcccactcaccaccgatattgcaccgggctatgatcatttcacctcc
ggtattggtgcggccatgattggctggttcggttgcgccatgctgtgttatgtcacgcca
aaagagcatttgggattgccaaacaaggatgatgtcaagcaagggctgattacctacaaa
atcgccgcccacgctgccgacctggccaaaggccaccctggcgcacagatccgcgacaac
gccatgtcaaaagcacgctttgaatttcgctgggacgatcagtttaatctggcgctcgat
ccgcaaaccgcacgcgcttatcacgacgaaaccctgccgcaggaatccggcaaagtggcc
catttctgctccatgtgcggccccaaattctgctcgatgaagatttcccaggaagtacgt
gattacgccgcgcagcaggaagccgtggcccagcccattgatgtcgggatggcgcagatg
tcagcagaattccgtgcccgcggcagcgagctataccacactgccaccagtctgccacag
gaggaatcctga
DBGET
integrated database retrieval system
