Prodigiosinella aquatilis: PCO85_01640
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Entry
PCO85_01640 CDS
T09220
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
prod
Prodigiosinella aquatilis
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prod03019
]
PCO85_01640 (rng)
03009 Ribosome biogenesis [BR:
prod03009
]
PCO85_01640 (rng)
Messenger RNA biogenesis [BR:
prod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PCO85_01640 (rng)
Ribosome biogenesis [BR:
prod03009
]
Prokaryotic type
rRNA processing factors
PCO85_01640 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
WJV54210
LinkDB
All DBs
Position
353726..355195
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AA seq
489 aa
AA seq
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MTAELLVNITPSEMRVAYIDGGILQEIHIEREAKRDIVGNIYKGRVSRVLPGMQAAFVDI
GLDKAAFLHASDIMPHTECVAGDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESETERERLKKTVAEYCDEQGGFIIRTAAEGVGEE
ELMQDAAFLKRLWSKVMERKKRNQTKYRLYGELALAQRILRDFAGAALDRIRVDSRLTYD
SLLVFTAEYIPEMTSKLEHYVGKQPIFDLYDVENEIQRALDRKVELKSGGYLIIDQTEAM
TTIDINTGAFVGHRNLDETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV
LNSLELALSKDRVKTSISGFSQLGLVEMTRKRTRESIEHVLCNECPTCHGRGRVKTVETV
CYEIMREIVRVHHAYDSDRFLVYASPLVCDALKSEESHALAEVEIFVGKQVKVQIEPLYS
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgagttgttggtaaacattacaccttcagaaatgcgagtggcttacattgac
ggcggcattctgcaggaaattcatattgaacgggaagccaagcgcgatattgtcggcaat
atttataaagggcgtgtgagccgtgtattgccaggcatgcaggctgcttttgtggatatt
ggtctggataaagcggcgtttctccatgcttccgatattatgccccacacagagtgtgtc
gccggggatgaacagaaaaatttccatgtccgggatatcgctgagttggtacgtcaggga
caggatctgatggtgcaggtggtcaaggatccgctgggtaccaaaggagcccgtttaacg
acggatattacgctaccttcacgctatctggtttttatgccgggagcctcccatgtgggt
gtttcacagcgaattgaaagtgaaacagagcgtgagcgtctgaaaaaaacagtagcagaa
tattgtgatgagcagggcgggtttattattcgcaccgcagcggaaggcgttggtgaagag
gaattgatgcaggatgccgcgttccttaagcgtttgtggagcaaggtgatggagcgtaaa
aaacgcaaccagaccaagtacagactctatggcgaactggctctggcacagcgtattctg
cgtgattttgccggtgctgcgctggatcgtattcgcgtcgattcccggttgacctatgat
tctctactggtgttcaccgcagagtatattccggaaatgaccagcaagctggagcattac
gtcggtaaacaacctatctttgacctctatgatgtggagaacgaaattcagcgagcgctg
gatcggaaagtagagttgaagtcaggtggttatctgattattgaccaaacggaagcaatg
accactattgatattaataccggcgcgtttgtgggccatcgcaatctggatgaaaccatt
ttcaataccaatatagaagcaacccaggccattgcccgccagctacggttgcgtaacctt
ggtgggattatcattattgatttcattgacatgaataatgaggatcaccgccggcgcgta
ctaaattcattagagctggcattgagtaaagatcgggtgaaaaccagtattagtggtttc
tctcaactaggattagtagagatgacgcgcaaacgtacccgtgaaagtatagagcatgta
ttgtgtaatgaatgtcccacctgccatggtcggggcagagtgaaaacggtggaaaccgtc
tgctatgaaatcatgcgtgaaattgttcgtgtccatcatgcctatgactctgaccgcttc
ctggtgtatgcctcacccttggtttgtgatgcactgaaaagcgaagaatctcatgctttg
gcagaagtggaaattttcgtgggcaaacaggtcaaagtgcagattgaacccttgtatagt
caggaacagtttgatgttgtcatgatgtga
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