Prodigiosinella aquatilis: PCO85_02715
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Entry
PCO85_02715 CDS
T09220
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
prod
Prodigiosinella aquatilis
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prod03000
]
PCO85_02715
Transcription factors [BR:
prod03000
]
Prokaryotic type
Helix-turn-helix
Other families
PCO85_02715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
HTH_23
AAA_5
PAS_4
HTH_30
Mg_chelatase
HTH_7
HTH_AsnC-type
HTH_24
HTH_50
nSTAND6
AAA
HTH_29
AAA_22
HTH_22
HTH_11
HTH_20
AAA_2
HVO_A0261_N
Myb_DNA-bind_8
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
WJV54402
LinkDB
All DBs
Position
583701..585677
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AA seq
658 aa
AA seq
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MNQHQRDHIDAVVETINGNTVSTTLQCCDRLIRDSWLRCVNDHGLDPGRMQDARILTWHE
LREHQGNLEEFRRIAHQGMERLFQQIAPAGYVVLLNNAKGITVDYLGDANTEISLRRAGL
FLGAEWSEASAGTCAVGTALASGEALTVHQGDHFDATHIPLTCTAVPLFDPQGQLHAVLD
ISALNSPQPKTSQQLALQIARIYAGQIENAYFEHLHRSDWMLKFSASYSLVNVNPDYLLA
FDASGKIVGHNHDAWRLLQNELGLPVSAQHAASPLLGLHFEQVFNASFDKLPDYMHTEGL
RQRTINLVNSDNTLFLTAQPPINRRGWRVAGASASLPAPLRAISGGDPTLQLQLQRAMKL
VDTPVNLFIHGETGCGKEFFARALHQSGNRRQRPFIAVNCAAIPPTLIESELFGAMPGSF
SGAGNKPRRGLIQDADGGTLFLDEIGDMPLEMQTRLLRVLSEHEVLPVGATRPIPVDIRV
ISASHRALERLIAEGSFREDLYYRLLGARIILPPLRERSDLDWLIDNMLAGKRCVLTAKA
RVHLHRHRWPGNLRELRNALEYACAICENACIHPEDLPEELHLSTRPLPPTETGKTALQN
NISPPATCPEGLALIQHLRAAQWNHSAVARQLGISRMTLYRRMQRLGIRSPNQTDTYN
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcaacaccagcgtgatcatattgacgcggtagtcgaaaccattaacggaaacacc
gtctcaacaaccttgcagtgctgcgataggctcatccgcgattcctggctacgctgcgtt
aacgatcatgggctcgaccctggccgcatgcaggatgctcgcattctcacctggcacgaa
ttgcgggaacaccagggaaatctggaagagtttcgccgtatcgcccatcagggcatggag
cgactttttcagcagattgcaccggccggctatgtggttctgctgaataatgccaaaggt
atcaccgttgattatctcggcgacgccaatactgaaatcagcctgcggcgcgcggggcta
tttctgggcgctgaatggtcagaggccagcgccggcacctgtgccgttggcactgcgttg
gcctctggcgaagcgttgacggtgcaccagggcgatcacttcgacgctacccacatccca
ctgacctgtaccgcagtgcctctgtttgatccgcaagggcaactgcatgccgtactggat
atctcggcgcttaactcgccgcagcccaaaaccagccagcagttggcgctgcaaatcgcc
cgcatttacgccggccagattgaaaacgcctattttgagcacctgcaccgcagcgactgg
atgcttaagttcagcgcgtcatactcgttggttaacgtcaacccggactatctgctcgcc
tttgacgccagcggcaaaatcgtggggcataaccatgacgcctggcgactgttgcaaaat
gagcttggtttgcctgtgtcggcacagcatgcggccagcccgctattggggttgcacttt
gaacaggttttcaacgccagcttcgataagctgccggactatatgcataccgagggcctg
cggcaacgcaccatcaatctggttaacagtgacaacacgctgtttcttaccgcccaaccg
ccgatcaaccgtcgcggctggcgcgtggccggcgcatcagccagcttgcccgcgccgtta
agagccatcagcggcggtgatccgacgttacagttgcagttacagcgtgcgatgaagctg
gtggataccccggttaatctgtttatccatggcgaaaccggctgcggtaaggagtttttt
gcccgggcattgcaccagtcgggcaaccgtcgccagcggccgtttatcgccgtcaattgt
gcggcaatccctcccaccctgattgaaagcgaactgttcggtgccatgccgggtagcttt
tctggcgcgggtaataaaccgcgccgtgggctgattcaggacgctgatggcggtactctg
ttcctggatgaaattggcgatatgccgctggaaatgcagacgcgcctgctgcgcgtgctg
tccgagcacgaagtgctgccggtgggcgccactcgcccgataccggttgatatccgggtg
atatccgcttcgcaccgtgcgctggaacggctgatcgctgaaggatcattccgtgaggat
ctctactaccggctgctcggcgcccgcataattttgccgccattgcgtgagcgcagcgat
ctggactggctgattgacaacatgctggcaggaaagcgttgtgtgctcaccgccaaggcc
agggtgcatctgcaccgccaccgttggccgggaaacttgcgcgaactgcgcaatgcattg
gaatacgcctgtgctatctgcgaaaacgcttgtatccaccccgaagatctgcccgaggag
ctacacctgtccacccggccgctgccacctaccgaaacaggcaaaaccgctcttcagaat
aacatatcaccacctgccacctgccccgaggggcttgcgttgatacagcacctgcgtgcg
gcacagtggaaccacagcgcggtcgcccgccagttggggatcagccggatgacgctctac
cgccgcatgcagcgtttgggtatccgctccccaaaccaaacggacacgtacaactga
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