Prodigiosinella aquatilis: PCO85_03420
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Entry
PCO85_03420 CDS
T09220
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
prod
Prodigiosinella aquatilis
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prod03016
]
PCO85_03420 (truB)
Enzymes [BR:
prod01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PCO85_03420 (truB)
Transfer RNA biogenesis [BR:
prod03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PCO85_03420 (truB)
Prokaryotic type
PCO85_03420 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WJV54517
LinkDB
All DBs
Position
706285..707241
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AA seq
318 aa
AA seq
DB search
MGRPRRRGRDINGVLLLDKPQNISSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGNVIEERPVTFTGDELAHALDGFRGTIQ
QIPSMYSALKYQGRPLYEYARQGLVVPREAREITVYELLFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVANYPIERMITLEQLNGLLDQDQVDASSLMSALDAQ
LLPMDSPVQAFPEVNLSLVMAGYLKLGQAVRTAGAPLSGMVRITEGEEHKFIGMGEMDVE
GRVAPRRLVVEHAEPAIQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtcctcgtcgtcgcggccgagatataaacggtgtgttattgctagataagccg
cagaatatatcgtctaatgatgtactacaaaaagtaaagcgtatcttcaatgccaacaga
gcaggccatacgggggcgttagatccgctggcaacaggaatgctgccgatttgtctggga
gaagcgaccaagttttcccagtatctgttggattcagataaacgttatcgtgttattgcc
cggttgggacagcgcactgatacttctgatgctgacggtaatgtgatcgaagaacgcccg
gttacgttcactggtgatgaactggcacatgcactagatggatttcgcggcactatccag
cagattccatccatgtattctgcactcaagtatcaggggcgaccgttatatgagtatgcc
cgtcaagggctggtggttccgcgtgaagcacgggaaatcactgtctatgagttgttgttt
atccgctgggaaggggatgagctggagctggaaattcattgctccaaaggcacttatatt
cgtaccattattgacgatttaggtgaaaaacttggttgtggtgcacatgtcatttacctg
cgtcgtttacaggtagcaaattaccctatcgagcgaatgataacgctggagcagcttaac
ggattgctggaccaggatcaggtggatgcatcttcactgatgtcggcactggatgcgcag
ttattgcctatggatagtccggtacaagcgtttcctgaagtgaatctttctttagtgatg
gcaggatatttgaagctgggccaggctgttcggactgccggggcgccactatcaggtatg
gtgcgcattactgaaggtgaagagcataaatttatcggcatgggtgagatggacgttgaa
ggacgtgtggcaccacggcgtttggtggtcgaacacgcagagccggctatccagtga
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