Prodigiosinella aquatilis: PCO85_03430
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Entry
PCO85_03430 CDS
T09220
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCO85_03430 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prod03019
]
PCO85_03430 (pnp)
03016 Transfer RNA biogenesis [BR:
prod03016
]
PCO85_03430 (pnp)
Enzymes [BR:
prod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PCO85_03430 (pnp)
Messenger RNA biogenesis [BR:
prod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PCO85_03430 (pnp)
Transfer RNA biogenesis [BR:
prod03016
]
Prokaryotic type
tRNA degradation factors
PCO85_03430 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
OB_RRP5_4th
S1_2
aRib
S1_RRP5
KH-I_KHDC4-BBP
UPF0181
KH_SLS1_2
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
WJV54519
LinkDB
All DBs
Position
707876..709999
Genome browser
AA seq
707 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKHAKPGQDFFPLT
VNYQERTYAAGRIPGGFFRREGRPSEGETLISRLIDRPIRPLFPDGFVNEVQVIATVVSV
NPQVSPDIVAMIGASAALSLSGIPFNGPIGVARVGYINDQYVLNPTIDELKESRLDLVVA
GTQGAVLMVESEADLLSEDQMLGAVVFGHDQQQVVIENIKALVAEAGKPKWDWSSPKVNA
ALQSRVQALSEARLGDAYRIIEKQERYTQVDAIKAEVTAMLLAEDATLDEDEIRDILGSI
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQNIDELTGERTDRFMLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKASE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDSYVVLSD
ILGDEDHLGDMDFKVAGSRDGVTALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISIPRGEISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAST
DGEKAKHAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEANAQPQESVSASGEEE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgtacgtaaattccaatatggtcaacatactgtcactctggaaaca
gggatgatggcgcgtcaggctactgctgctgttatggttagtatggatgacacggcagta
tttgtgacggtagtgggcgctaaacacgctaaacctggtcaggactttttcccgctaact
gtcaactatcaggagcgtacttacgctgctggtcgtatcccgggtggttttttccgtcga
gaaggtcgtccgagtgaaggcgaaactctgatctcccgcctgattgaccgtcctattcgt
ccgctgttcccagatggttttgtgaacgaagttcaggttattgccacagtggtgtcggtg
aatccgcaagtaagcccggatatcgttgccatgatcggtgcttccgctgcgttgagcctg
tctggtattccgttcaatggtcctatcggtgtcgctcgtgtgggttatatcaacgaccag
tatgtgctgaacccgactattgatgaactgaaagaaagtcgtctggatctggttgtggcc
ggtacccagggggctgtgctgatggttgaatccgaggctgacctgttaagtgaagatcag
atgttgggtgctgtcgtgtttggtcatgatcagcagcaggtagttattgagaacatcaag
gcgctggttgctgaagcaggtaaaccgaaatgggactggtcgtctccgaaagtgaatgct
gcattgcagagtcgtgtgcaggcgctgtctgaagcccgtttaggtgatgcttatcgcatt
attgaaaagcaagagcgttacacgcaggttgatgctatcaaagctgaagttactgcgatg
ctattggcagaagatgctacgctggatgaagatgaaatccgcgacattttgggcagcatt
gagaaaaatgtggttcgtagtcgagtgttacgtggtgaaccgcgtattgatggtcgtgaa
aaagacatgatccgtggtctggatgtgcgcaccggtgtgttgccgcgtactcatggttct
gctctgtttacccgcggtgagacacaagcgctggtgaccgccacattgggtactgagcgt
gatgctcagaatattgatgaactgaccggtgaacgcactgatcgtttcatgttgcactat
aatttccctccgtattccgtaggtgagactggtatggtcgggtcaccgaagcgccgtgag
atcggtcatggtcgtctggcaaaacgtggtgttctggctgttatgccgaaagcgagtgaa
ttcccgtataccgtgcgtgtggtatccgaaattaccgaatctaatggctcctcttctatg
gcgtctgtttgtggtgcctctttggcattgatggatgctggtgtaccgattaaagccgct
gtagcgggtatcgctatgggattggtaaaagaaggcgacagctatgttgtcttgtccgat
atccttggtgacgaagaccacttgggtgatatggactttaaagtggctggtagccgtgat
ggtgtaaccgcgctgcagatggacatcaagattgaaggtattacccgtgaaatcatgcaa
gttgcgctgaatcaggcaaaaggtgcccgtttgcatattctgggtgtgatggagcaagca
atcagcataccgcgtggtgaaatttctgagttcgcaccgcgtattcatacgatcaagatc
agtactgacaagatcaaggatgttattggtaaaggcggttctgttatccgtgcattgacc
gaagagactggcactaccatcgaaattgaagatgacggtacagtgaaaatcgcgtcaacg
gatggcgagaaggcaaaacatgccattcgtcgtatcgaagagattaccgctgagattgaa
gtcggtcggatttatcaaggtaaagtgacccgcattgtagactttggtgctttcgtagct
atcggtggtggtaaagaaggtttggtacatatttctcaaatcgctgataagcgtgtcgag
aaagtgactgattatctacaaatgggtcaggaagttccggttaaagtactggaagttgat
cgccagggacgagttcgtctgagcattaaagaagccaatgcccagcctcaggaatcggtt
tccgcttccggggaagaagaataa
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