Prodigiosinella aquatilis: PCO85_03505
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Entry
PCO85_03505 CDS
T09220
Symbol
lsrB
Name
(GenBank) autoinducer 2 ABC transporter substrate-binding protein LsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
prod
Prodigiosinella aquatilis
Pathway
prod02010
ABC transporters
prod02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PCO85_03505 (lsrB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PCO85_03505 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prod02000
]
PCO85_03505 (lsrB)
Transporters [BR:
prod02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
PCO85_03505 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Glyco_tran_WecG
Motif
Other DBs
NCBI-ProteinID:
WJV54534
LinkDB
All DBs
Position
complement(721704..722723)
Genome browser
AA seq
339 aa
AA seq
DB search
MKPQRLKKLALVCALGFACITTAQATERIAFIPKLVGVGFFTSGGNGAIAAGKSLGVDVT
YDGPTEPSVSGQVQLINNFVNQGYNAIVVSAVSPDGLCPALKRAMQRGVKILTWDSDTKP
ECRSIYIDQGTPNQLGSMLVDMAAHQVKKEKAKVAFFYSSPTVTDQNQWVNEAKKKIQQE
HPGWQVVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKRTNVA
IVGFSTPNVMRPYVERGTVKEFGLWDVVDQGKISVYVANEMLKKGTLNVGDKIDIPNVGT
VEVSANSIQGYTYEAKGSGIVLLPQRVIFTKDNINKYDF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacaaagattaaaaaagctggcactggtttgtgccctcggatttgcctgcatc
acgactgcacaggcgacagaacgcatcgcctttatcccgaagctggtcggggtgggtttc
ttcaccagtggcgggaacggtgctatcgcggccggtaagtcgctaggagtggatgtcacc
tacgatgggccgacggaacccagcgtatccggtcaggttcaattgatcaataactttgtt
aatcaaggttataacgccatcgtggtttcagcagtatcacccgatggcttatgcccggca
ctaaaacgcgccatgcaacggggcgtaaaaattctgacctgggattctgacaccaagccg
gaatgccgctccatttatattgatcagggaacacctaatcaattggggtcgatgctggtc
gatatggccgctcatcaggtgaagaaagagaaggcgaaagtggcgttcttctattccagc
ccgacagtgaccgaccagaatcagtgggtaaatgaagcgaagaagaaaattcagcaagag
catcccggctggcaagtggtgaccacgcagttcggctataacgacgcgaccaaatcgctg
caaaccgccgagggcattttaaaagcctacagtgatttggatgccattattgccccggat
gcgaacgccctgccagcggcagcacaggcggcagagaacctgaaacgcaccaatgtggcc
attgtcggattcagtaccccgaatgtgatgcgcccctatgtcgagcgcggtacggtcaag
gagttcggtctgtgggatgtggttgatcaaggcaaaatctcagtctatgtcgccaatgag
atgctgaaaaaaggcacgctgaatgtcggggacaagattgatattccgaatgttggcacc
gttgaagtatccgcgaacagtattcagggctacacctacgaggcaaaaggcagcggtatc
gtcttactgccacagcgggtcattttcaccaaagacaatatcaataagtacgacttttaa
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