Prodigiosinella aquatilis: PCO85_03510
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Entry
PCO85_03510 CDS
T09220
Symbol
lsrD
Name
(GenBank) autoinducer 2 ABC transporter permease LsrD
KO
K10557
AI-2 transport system permease protein
Organism
prod
Prodigiosinella aquatilis
Pathway
prod02010
ABC transporters
prod02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PCO85_03510 (lsrD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PCO85_03510 (lsrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prod02000
]
PCO85_03510 (lsrD)
Transporters [BR:
prod02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
PCO85_03510 (lsrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
PspB
Motif
Other DBs
NCBI-ProteinID:
WJV54535
LinkDB
All DBs
Position
complement(722791..723792)
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AA seq
333 aa
AA seq
DB search
MSIYRRYGWELSLGALLVLEILLFGFSNPRMLDINVLLFSTSDFICIGIVALPLTMVIVS
GGIDISFGSTIGLCAIFLGVMFKAGVPMSMAIPLTLIVGALCGLINAGLILYTGVNPLVI
TLGTMYLFGGSALLLSGFSGATGYEGIGGFPTAFTDFANQTLFGLPVPLVIFMVCVLLFW
LLMHRTHSGRNIFLIGQNSRVARYSALPVARTLYLLYALTGMASAIAAVLLVSYFGSARS
DLGASFLMPAITAVVLGGANIYGGSGSILGTALAILLVGYLQQGLQMIGTPNQISSALSG
ALLILVVVGRSISLHRQLINEWWQRRRTRRSVI
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagtatctatcgacgttacggatgggaactgtctctgggcgcactgctggtgttggag
atattgctgttcggtttctcaaatccgcgcatgttggacatcaatgtgttgctgttcagc
accagcgattttatctgcatcgggattgtggccctgccactgacaatggtgattgtcagt
ggcggcattgatatctcattcggctccaccatcggattatgcgccatattccttggcgtg
atgtttaaggctggcgtgccgatgagtatggcgatcccattaaccctgatcgtcggcgcg
ctatgcggtttaattaatgccggattgattctgtataccggtgtcaacccgttggttatt
acactcggaacaatgtatctgtttggtggcagcgcattattactgtccggtttttccggc
gcgaccggttatgaaggtattggcggtttcccgactgcattcacggacttcgctaaccaa
acactgttcggcctgccagtgccactggtgatatttatggtgtgtgtgctgctgttctgg
ctgctgatgcaccgtactcacagtggccgcaacatttttcttatcggacaaaacagccgg
gtagcccgttacagtgcgctccccgtcgcccgcaccttatacctgctgtatgccttgact
ggcatggcctccgccattgccgccgtcctgctggtgtcttacttcggctccgcacgctct
gacctgggagcctcttttctgatgccagccatcaccgccgtggtgctgggcggtgccaac
atctacggcggttcaggctctatcctcggtaccgcactggcaatactactggtcggttac
ttacaacagggtttgcagatgattggcacgccgaaccagatatccagtgcgctgtccggc
gcactactgattctggtagtggtcgggcgttctatcagtctgcacagacagttgattaat
gaatggtggcaacgccgccgcaccagacggtcggtaatctaa
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