Prodigiosinella aquatilis: PCO85_05820
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Entry
PCO85_05820 CDS
T09220
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCO85_05820 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prod03019
]
PCO85_05820 (rppH)
Messenger RNA biogenesis [BR:
prod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PCO85_05820 (rppH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
WJV54943
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All DBs
Position
1231254..1231781
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AA seq
175 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGESAEQAMFRELFEEVGL
RKKDVRILAFTRSWFRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMCNESDINMQSSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFITPVIQLQENAAARMSSGSRRKRG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgttggaattgtgatttgtaatcggcagggg
caagttctctgggctcgtcgctacggtcagcactcctggcagtttccccagggtgggatt
aacccaggtgaaagtgcagaacaggcgatgttccgtgaactgttcgaagaagttggtttg
cggaagaaagatgtccgtatcttggctttcacccgtagctggtttcgttataaattgcca
aaacgtttggtgcgttgggatacaaaaccagtctgtatcgggcaaaagcaaaaatggttt
ctgctacagttaatgtgtaatgaatcagatatcaatatgcaaagcagtagcacgcctgag
tttgatggttggcgttgggtgagctactggtatccggtacgtcaggtggtttcttttaaa
cgggatgtttatcggcgggtgatgaaggagtttatcactccagttatacagttacaggag
aatgctgctgcccggatgtcatcaggttccagacgaaaaagaggataa
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