Prodigiosinella aquatilis: PCO85_06310
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Entry
PCO85_06310 CDS
T09220
Name
(GenBank) SbcC/MukB-like Walker B domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
prod
Prodigiosinella aquatilis
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prod03400
]
PCO85_06310
DNA repair and recombination proteins [BR:
prod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PCO85_06310
Archaeal homologous recombinant proteins
PCO85_06310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_23
AAA_29
ABC_tran
cobW
AAA_21
TsaE
NTPase_1
nSTAND3
GTP_EFTU
AAA_22
AAA_25
AAA_14
Motif
Other DBs
NCBI-ProteinID:
WJV55031
LinkDB
All DBs
Position
complement(1333656..1337339)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKVDFTREPFVSNSLFAITGPTGAGKTTLLDAICLALYHQTPR
LKVTPTQNELMTRHTAESLAEVEFEVKGIAYRAFWSQRRARNSPEGNLQPPKVELARCAD
GKILTEKINDKLAMIADITGLDFDRFTKSMLLSQGQFAAFLNADANERAELLEELTGTEI
YGLISERVFEQHKEAQIQLDTFRARASSIELLSDEQRAELEHQLSARQQREQSLSLQRDE
ILAHQRWYEALAQCQQALTATQQQRSQVEQMQQQARPQLERLATGEPAEKLRPLYDTQER
CQREKTLLAQHITDLTDQLTNQQSVVALLKSQAEKAIVAQQEHADYRQQQETLINEQVLP
LDHHIATQQEQRNRYQHALEQQRNQQKAAIGKLEQLRQQYHQTQERLRQIDIYRQQNLMY
QHWGSHIPLWQAQFPQQRKLLQELLILQDKLAQQQEQSEHLQRQQVKLIEKRDAQQTATG
RAQQLLEQHQQRHQQQEQQLPVTTLQQQLVQLTTQRPQRQQLSTNATVLHRLSNQYQLLD
AQQQASQHRIEQLEALQLRQRQEYQQQAQHLIDLDKRYELEQRIASLENERSQLQPGKEC
PLCGSTHHPAVERYQTLRVSETQNRLHALRQEVETLKATVIQTETQLQLLQQQRQQQQTA
LLNVSQEHEALQQECQMLSEHLLVNFNPQQPETLTTWLEQCDEQERSLQSQITEREQNQH
QVQKSKDLLTAANQLLQQTEQQMALNIQQQHMLETTHIELQQTREKAEQEQNRLHQSITQ
SLMRFGLPIPDTDEQESWLGQRQMEWLRWQENEHEQHQQTPLLSSLNTEIEGDERRLREI
DEAIKTQQQQLTETTQSLEQAQQTRWQLFGNKQVGDILGQLRQLSQKHEQYRQKSQAQWQ
QGQSAFSRLSGEKGSLEQQYQRTQTAYQQAVQHFDTALQQSQFDNEDTFKLALLDEAERN
QLMALKEKISQRQQQVEALYQQAELALAQHLARKPDSLSEDINPSDINQTLAGLSNELKT
EVQRQGELRQQLASDQQHRLKQQVLLDDITKSQQGCDDWGYLNYLIGSQKGDKFRRFAQG
LTLDHLVYLANRQLSRLHGRYLLQRKASDTLELQVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSNKTRIDSLFLDEGFGTLDGETLDSALDVLDNLNASGKTIGVISHVEAMK
ERIQVQIRVKKRNGLGISQLDSEYAVK
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactcagcctgcgtttaaaaaacctcaactcgctacaaggcgagtggaaagtt
gatttcactcgcgaacctttcgtcagtaatagcctgtttgccatcaccgggccgaccggt
gctggtaaaaccacactgctcgacgccatctgtctggcgttatatcaccagacaccgcgg
ctgaaagtgacacctactcagaatgaactgatgacgcgacataccgctgagtcgctggcc
gaagttgaatttgaagtcaagggtattgcctatcgggccttctggagtcaacgtcgggcc
cgtaattcaccggaagggaatctacaaccaccaaaagtcgagttagctcggtgtgccgac
ggcaaaattctgacagaaaagatcaatgacaagctggcgatgattgccgatatcaccggc
cttgatttcgaccggttcaccaaatccatgctgctatcccaagggcaattcgccgctttt
ctcaacgccgatgccaacgaacgggcagaattactggaagaactgacaggtacggagatt
tacggcctcatttcagaacgggtatttgagcagcataaagaagcacagattcaattggat
acattccgcgcacgcgccagcagcatcgaattgctgagtgatgaacagcgtgcggaactg
gaacatcagttgtcagcacgacaacaacgagagcagtcactgagtctacaacgtgatgaa
atcctcgcacatcagcgctggtatgaagcactggcgcaatgtcagcaggcactcactgcc
acgcaacagcagcgcagtcaggtagagcagatgcaacaacaggctcgaccacaactggaa
cgactggcgacaggtgagccagcggaaaaattacgtcctctttatgatacgcaagaacga
tgtcaacgtgaaaaaacgttactggcccagcacattaccgacttgactgaccagttgacc
aaccagcaatccgtcgtggctttactgaaatcacaagccgaaaaagcgatagtggcgcaa
caggagcatgccgattaccgtcagcaacaggaaaccctgatcaacgaacaagtcctaccg
ctggaccaccatatcgccacgcagcaggagcaacgcaaccggtatcagcacgcgctagag
cagcagcgtaaccaacagaaagccgctatcggcaagctagagcaattacgtcagcagtat
caccaaacccaggaacggttaaggcaaattgacatttaccgacagcaaaacctgatgtat
caacactggggaagccatatcccgctttggcaggcccagttcccacagcaacggaaacta
ttacaggaactactgatactacaggacaaacttgcacaacagcaggagcagtcagaacat
ctgcaacgtcaacaggtgaagctcatcgaaaaacgtgatgcacagcagaccgccaccgga
cgagcgcagcagttactcgagcaacatcagcaacgccaccagcaacaggaacaacagttg
ccagtaacaacgctccagcagcagcttgtccaactcaccactcagcgaccgcaacggcaa
caactctcgaccaacgccacagtcctgcaccgattatccaaccagtatcaattgctggat
gcacagcaacaggcgtctcaacaccgcatcgagcagttggaagcattacagttacgacaa
cgtcaggagtatcaacagcaggcccaacacctgatcgatttagataaacgctatgaactg
gaacagcggattgccagtctggaaaacgaacggagtcaattacaaccgggtaaagagtgt
ccattgtgtggttctacacatcatccggcagttgaacgctatcagacactgcgcgtttca
gaaacccagaatcgactgcatgccctacgtcaggaagtggaaacactgaaggcgacggtg
atacaaacagaaacgcagctacagttattacagcaacagcgtcagcaacaacaaactgca
ctgttaaatgtttctcaggaacatgaggcactccaacaggaatgccaaatgctaagtgaa
cacttacttgtaaacttcaacccacagcagccagaaacacttaccacctggctggaacag
tgcgatgagcaggaacgatcactccagtcccagattacagaacgagagcaaaatcagcac
caggtacaaaaaagtaaggatttactgaccgcagccaatcagctattgcaacaaacggaa
cagcagatggcgttgaatatccagcaacaacacatgctggaaaccacgcatatcgaattg
caacaaacacgagaaaaggccgagcaggagcaaaatcgcctgcaccaatctatcacgcag
tcacttatgcgcttcggtctgccaattcccgatactgacgagcaagaatcatggcttggt
caacgtcagatggagtggctgcgatggcaggagaacgagcacgaacaacatcagcaaacc
cctctattatcgtcactgaataccgaaattgaaggtgatgaacggcgtttgcgtgaaata
gacgaagccatcaaaacacaacaacagcaattgacggaaacgacgcagtcgctggaacaa
gctcaacagacccgctggcagttattcggtaacaaacaggtcggtgacattcttgggcaa
ttgcgtcagctcagtcagaagcatgaacaataccgtcagaagtctcaggcacaatggcag
caaggacagtctgcgttcagccgtcttagcggtgaaaaaggcagtctggaacagcaatat
caacgaactcaaacggcttatcagcaggcggtacagcattttgataccgcgctgcaacaa
agccagtttgataatgaagacacctttaaactcgcgctgttggatgaagccgagcgtaac
caacttatggcgttgaaagaaaaaatcagtcagcgacagcagcaggttgaggcactgtat
cagcaggcggaactggcgctggcacagcacctggccagaaaaccggattcactgtcagaa
gacattaacccgtcagatatcaatcaaacgctcgctggattgagcaatgagcttaaaacc
gaggttcaacgacaaggagagttacgtcaacaactggccagtgaccagcaacaccgactc
aaacaacaggtattgctggatgatattaccaaaagccagcaaggatgcgacgactggggt
tatcttaactacctgatcggctcgcaaaaaggcgacaaattccgccgttttgcccaggga
ttaacactggaccatctggtctatttggccaaccgccaactttcacgcctgcatggccgt
tatctgctgcaacgtaaagcctctgacacgctggagttacaggtagtagatacctggcag
gcggacgccgttcgggatacgcgaaccttgtccggcggggaaagttttctggtcagtctg
gcgctggcgctggcgctctccgatttggtcagtaacaaaacacgcattgactcactattt
ctggatgagggcttcggtacgctggatggcgaaacgctggattccgcgctggatgtactg
gataacctgaatgcctctggcaaaacgattggcgtaatcagtcatgttgaggcgatgaaa
gagcgaattcaggtacaaattcgggtaaaaaaacgcaatggtctgggcatcagccaactc
gacagtgagtatgcggtgaaataa
DBGET
integrated database retrieval system
