Prodigiosinella aquatilis: PCO85_07070
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Entry
PCO85_07070 CDS
T09220
Symbol
mrdA
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod00550
Peptidoglycan biosynthesis
prod01100
Metabolic pathways
prod01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PCO85_07070 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PCO85_07070 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prod01011
]
PCO85_07070 (mrdA)
Enzymes [BR:
prod01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PCO85_07070 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
prod01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PCO85_07070 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WJV55170
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All DBs
Position
complement(1510026..1511930)
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AA seq
634 aa
AA seq
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MKIEHNPFRDYTAEAALFVRRAFVAFLGIVLLTGILIANLYHLQISRFDDYRTRSNENRI
KLVPIAPSRGIIYDRNGIPLALNRTIYQLELVPEKVTNVDATLNALKPIVNLTDEDIDNF
KKERKHSRRFASIPLKTDLNEIQVARFSVNQYRFPGVEVKGYQHRYYPYGSALTHVLGYV
SKINDKDLERLDKEGKLADYAATHDIGKLGIEHYYETQLHGKPGYEEVEVNNRGRVIRQL
HEQPPQAGKDIYLTIDLNLQTYIEKLLVGSRAAVIVTDPRDGSILAMVSTPSYDPNPFVD
GISSKNYRALLDNPDRPLINRATQGVYPPASTVKPYIAVSALSAGVITPYTSLFDPGWWQ
LPGSEKRFRDWKRWGHGRLNLTKALEESADTFFYQVAYDMGIDRLSEWMTKFGYGQYTGI
DISEERAGTMPTRAWKLKRYKKPWYQGDTIPVGIGQGYWTATPIQMMKALMTLINDGQVK
TPHLLGSIRENGVLVPYRQTTHQQIGDIHSGYWEIAKDGMYGVANRPNGTAYKNFANSSY
KIAAKSGTAQVFGLKANETYNAHKISERLRDHKLMVAFAPYNNPRIAVSVVLENGGAGAS
VGTITRQILDHIMLGDNNTILPDAPPSPPGSETE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagaacataaccctttccgtgattataccgctgaagcagctctgtttgttcgt
cgcgcatttgtggcgtttttaggcattgtgctacttaccggtattctcatcgccaatctt
tatcatctgcaaatttcacgttttgacgattatcgtacccgttccaatgaaaaccgcata
aaactggtccctatcgcacccagtcgtggcatcatatatgatcgcaatggcatccctctg
gcactcaatcgcacaatctatcagctagagctggtcccagaaaaagtcaccaatgtcgat
gccacactgaacgcactgaagcctatcgttaatctgacagatgaagatatcgataacttc
aaaaaagagcgtaaacactcacgccgttttgcctccatacctttaaaaaccgacctgaat
gaaattcaggtggcacgtttctcggtgaatcaatatcgttttcccggtgttgaggtgaaa
ggatatcaacaccgctactacccttatggttccgcactgactcacgttctcggttatgtt
tcaaaaattaacgataaagaccttgaacgactggataaagaaggcaaactggccgactat
gccgcgacccacgacattggtaagctgggcattgaacattattatgaaacgcagctgcac
ggaaaacccggctacgaagaagtagaagttaacaatcggggacgggtcatcaggcaactg
catgagcaaccaccgcaagcgggaaaagacatctacctgacgattgacctgaatctgcag
acttatatcgaaaaactactggtgggaagccgagcagcagtaattgttactgatccgcgg
gacggtagcatattggcgatggtatccacgcccagttatgacccgaatccatttgtggat
ggcatttccagtaaaaattaccgcgccttactcgataaccccgaccggcccttgattaac
cgagccactcaaggcgtgtatcctccagcctccaccgtaaaaccctatattgcggtttca
gctctgagtgccggtgttattacgccctatacgtccttgtttgaccctggttggtggcaa
ttgccaggatccgagaaacgtttccgagactggaaacgatggggtcatggccggctgaat
ctgaccaaggcactggaggaatccgctgataccttcttttatcaagtcgcttatgatatg
gggattgatcgcctgtccgaatggatgaccaagtttggttacggccaatataccggtatt
gatatatccgaggaacgcgcaggcaccatgccgacacgcgcctggaaattgaaacgatac
aaaaaaccctggtatcagggtgataccataccggtggggattggtcagggttactggaca
gcgacgccgatccagatgatgaaagcactgatgaccctgattaatgatggacaggtgaaa
accccgcatctgttgggcagtatcagggaaaatggcgtattagtcccttaccgtcaaacc
acccatcagcaaattggcgatatccactccggttactgggaaatcgccaaagatggcatg
tatggcgtagcaaaccgccccaacgggacggcatataaaaattttgccaactcttcttat
aagatcgcggctaaatcagggactgcacaggtattcggactaaaagcgaacgaaacctat
aacgcacataaaatttcagaacgattacgcgatcataagctgatggtcgcttttgcacct
tataataatcccagaatcgcggtatctgtcgttctggaaaatggcggtgcaggcgcgtct
gtagggactatcacgcgccagattctcgaccatattatgttaggtgataacaatacaata
ctaccggatgcgcccccctcgccacccggcagtgaaaccgagtaa
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