Prodigiosinella aquatilis: PCO85_07335
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Entry
PCO85_07335 CDS
T09220
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod00020
Citrate cycle (TCA cycle)
prod00190
Oxidative phosphorylation
prod00650
Butanoate metabolism
prod00720
Other carbon fixation pathways
prod01100
Metabolic pathways
prod01110
Biosynthesis of secondary metabolites
prod01120
Microbial metabolism in diverse environments
prod01200
Carbon metabolism
Module
prod_M00009
Citrate cycle (TCA cycle, Krebs cycle)
prod_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
prod_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PCO85_07335 (sdhA)
00650 Butanoate metabolism
PCO85_07335 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PCO85_07335 (sdhA)
00720 Other carbon fixation pathways
PCO85_07335 (sdhA)
Enzymes [BR:
prod01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PCO85_07335 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
Thi4
FAD_oxidored
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
WJV55214
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Position
1563888..1565654
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AA seq
588 aa
AA seq
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MNLPVREFDAVVIGAGGAGMRAALQISQMGLSCALLSKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAVLELEHMGLPFSRLDDGSIYQRPFG
GQSRNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVMGC
TAICIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVTGQVLAVNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLIVFGRSAGMHLQ
ESLEEQGATRDASNSDIEASLDRLNRWNSTRSGEDPVEIRKALQACMQHNFSVFREGDAM
AKGLEELKVIRERLKNARLDDTSSDFNTQRIECLELDNLMETAYATAVSANFRTESRGAH
SRFDYPDRDDDKWLCHTLYQPQTESMTRRKVNMQPKLRPAFPPKVRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgccagtcagagagtttgatgctgttgttatcggtgcaggtggcgcaggtatg
cgcgctgcattgcaaatttcccagatgggcctttcctgcgccctgctatccaaagtgttc
ccgacccgttcccacaccgtttccgcccagggggggattaccgttgcgcttggtaatacc
catgaagataactgggaatggcatatgtatgacacggtgaaaggctccgattatatcggt
gaccaggatgctattgaatacatgtgtaaaactggtccggaagcggttctggaactggaa
cacatggggttgcctttttcccgtctggatgatggcagtatttatcaacgaccgtttggt
ggtcagtccagaaactttggcggtgagcaggcggcgcgtactgcggcggcggcggaccgc
accggtcatgctttgttgcataccctttatcagcagaacctgaagaatcacacgacgata
ttttctgagtggtatgcactggatctggtgaaaaatcaggatggtgcggtgatgggatgt
accgccatctgtatcgaaaccggtgaagtcgtatatttcaaggctcgtgccaccgtgctg
gcaaccggcggtgccggacgcatttatcaatccacgacgaacgcccacattaataccggt
gacggtgttggtatggcattgcgtgccggtgtgccggttcaggatatggaaatgtggcag
ttccatccaacaggtattgccggtgctggtgtgctggttactgaaggctgtcgtggtgaa
ggtggctatttgctcaataagcacggcgaacgcttcatggaacgttacgcgccgaatgcc
aaagatctggcgggtcgtgatgttgttgctcgttcaatcatgatcgaaatccgtgaaggt
cgtggttgtgatggcccatggggtcctcatgccaaattgaaactagaccatctcggtaaa
gacgttttggaatcccgtctgccaggtatcctggaactttcccgtactttcgcccatgtt
gatccagttaaagagcctattccggttattccaacctgtcactatatgatgggggggatc
ccgaccaaggtgaccggtcaggtattggccgtgaatgaacaaggtgaggatgtggttatc
cccggtttgtttgctgtcggtgaaattgcctgcgtatctgtacatggggcgaatcgtctg
ggcggtaattcactgctggacttgatcgtgtttggacgctcagccggtatgcatctgcag
gagtcactggaagaacagggtgctacccgtgatgccagcaattctgatatcgaggcttct
cttgatcgccttaatcgctggaacagtacccgttccggtgaagatccggtggaaattcgt
aaagcactacaggcctgtatgcaacacaacttctcggtatttcgtgaaggtgatgccatg
gcaaaaggtttggaagagcttaaggtgattcgtgagcgtttgaagaatgctcgtctggat
gatacttccagcgatttcaatacacagcgtattgaatgtctggagttggataacctgatg
gaaaccgcctatgccaccgctgtttcggctaatttccgcactgagagccgtggtgcgcat
agtcgtttcgattatcctgatcgtgatgatgataagtggttgtgtcatacgctctatcaa
ccgcaaaccgaaagcatgacgcgccgtaaggtgaacatgcagcctaaactgcgcccggct
ttcccgccgaaagtgcgtacttattaa
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