KEGG   Prodigiosinella aquatilis: PCO85_09760
Entry
PCO85_09760       CDS       T09220                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
prod  Prodigiosinella aquatilis
Pathway
prod03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:prod00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PCO85_09760 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prod03400]
    PCO85_09760 (ruvB)
Enzymes [BR:prod01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PCO85_09760 (ruvB)
DNA repair and recombination proteins [BR:prod03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PCO85_09760 (ruvB)
    RecFOR pathway proteins
     PCO85_09760 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_3 AAA_22 AAA_16 Mg_chelatase TIP49 AAA_14 nSTAND3 Rad17 AAA_18 AAA_2 NTPase_1 AAA_17 RNA_helicase AAA_24 Bac_DnaA AAA_28 NB-ARC ABC_tran TsaE NPHP3_N
Other DBs
NCBI-ProteinID: WJV55642
LinkDB
Position
2097146..2098150
AA seq 334 aa
MIEADRLIAPIVVEEEEIFDRAIRPKLLSEYVGQPKVREQMDIFIQAARKRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLQHIVSRSALCLGLEMTEDGALELARRSRGTPRIANRLLRRVRDFSEVKSDG
TITLDVAVQAMDMLAVDIEGFDFMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFLQRTPRGRIATQHAYRHFGLTREE
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgattgaagctgatcgtttgattgcgccgattgttgttgaagaggaagagatcttcgac
cgggctatccggcctaaactgttgtcggagtacgtcggacagccgaaagtccgtgagcag
atggatatatttattcaggcggcgcgcaagcgtggtgacgcgttggatcatctgctgatt
ttcggtccgccggggctgggtaaaaccacactggccaatattgtcgcgaacgaaatgggt
gtcaatttgcgtaccacatccggcccggtgctggagaaagcgggtgatctggcggcatta
ctgaccaatcttgaaccccacgacgtgctgtttattgatgaaattcaccgtctatcgcca
gtagtagaagaagtgctttatccggctatggaagattatcagttggatatcatgattggc
gaaggaccggcggcgcgctccattaaactggatttacctccgtttacgctaattggtgcg
accactcgtgccgggtcgctgacctctccgttgcgtgaccgtttcgggatcgtgcagcgt
ctggagttttatcaggtcgcggacttgcagcatattgtcagccgtagcgcactgtgtctg
gggctggagatgacggaagatggcgcactggaattagcccgtcgttcccgcggtacgcca
cgcatcgccaaccggctgttgcgccgggtacgtgacttttctgaagtgaaatcggatggc
acgattacgctggacgtggccgttcaggcgatggatatgctggcggtagatattgaagga
tttgattttatggaccgcaagctgctgttggccgtgatcgataaatttatgggtggaccg
gtagggttggataacctggcagcggccatcggtgaagagcgtgaaaccattgaagatgtg
ctggagccttacctgattcagcaaggatttttgcaacggacaccgcgtgggcgtatcgcc
actcagcacgcttatcgtcattttggcctgactcgcgaggagtaa

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