Prodigiosinella aquatilis: PCO85_10355
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Entry
PCO85_10355 CDS
T09220
Name
(GenBank) pectate lyase
KO
K01731
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
prod
Prodigiosinella aquatilis
Pathway
prod00040
Pentose and glucuronate interconversions
prod01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PCO85_10355
Enzymes [BR:
prod01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
PCO85_10355
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_2
Glyco_transf_24
Motif
Other DBs
NCBI-ProteinID:
WJV55748
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Position
complement(2209258..2210889)
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AA seq
543 aa
AA seq
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MSIFSHLDTSKEIQLDLWLAALNSHIEKIQQYGHSHINPTPLLADGFDVQTRAPVVWKFP
DGHDAPISNFASQQNWLRLLDSMSIVTEIEKYQKTAISQCEFFFSHFVDENSGLFYWGGH
RFINLDSLKSEGPESKSLVHELKHHLPYYPFLHRINAEKTLHFLQGFWNAHVEDWNSLDL
GRHGDYAKPRDPHVFMHTHHDVVDPAKWPELPLTKGLTFVNAGTDLIYAAFAYAQFSGDK
QAALWGKHLYRQYVLARNPETGMPVYQFSSPLQRQPIPDDDNQTQSWFGDRAQRQFGPEF
GTIAREANVLFRDMRPLLIDSPLAMLDILHQHPDSDMLEWVISGLKNYYQYAYDAASNTL
RPMWNDGQDMTGYRFKRDGYYGKAGTELKPFPLEGDYLLPLVRAYRLSGDVELYTLITTM
LERLGKDGLSTVATPFLLLAMIELAEYQQSKKWADHAWALAEILFARHFHHGLLTRSEKH
RYVRLDDPFPLILLALVAACKNKLNKCPPILTQGGYVHGDFRINGENRVIYDIEFIYPEL
LTH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttttagtcacttagacaccagcaaagaaatacagctcgatttatggctcgct
gcgctgaacagccatattgaaaaaatacagcaatatggtcacagccacattaatccgaca
ccgttattggctgatggcttcgatgtacaaacgagagcgccagttgtctggaaatttcct
gatgggcacgatgctcccatttctaattttgccagtcagcaaaattggcttcgtttgtta
gattccatgagtatcgtcacagaaatagagaaatatcagaaaacggctatttcccaatgt
gaattcttcttttctcactttgttgacgaaaatagtggtcttttctattggggtggacat
cgctttattaatctggactcgttgaaaagcgagggaccagaatcaaaatctctggtgcat
gaattaaaacaccatttaccctattacccgttcttgcaccgtattaatgccgaaaaaaca
cttcattttctacagggcttctggaacgcacacgtcgaggattggaactcactggattta
ggtcgtcatggtgattatgccaagccacgcgatccacacgtttttatgcacacgcaccac
gatgtggtagaccctgcaaaatggcctgaattaccgctgacgaaagggcttacttttgtc
aatgccggtactgacctgatttatgctgcctttgcctatgcacaatttagcggggataaa
caagcggccttatggggaaaacatctctatcgtcaatatgtattggcgcgcaatccggaa
accggaatgccggtgtaccaattcagctcgcccttgcaacgccagccgattcctgacgac
gataatcagacacagtcctggttcggcgatcgcgcccaacgccagtttggcccggaattc
ggcaccattgcccgtgaagcgaatgtgttattccgagatatgcgtccattgttgatcgac
agcccactggcgatgctggatatcctgcatcagcaccctgacagtgacatgctggaatgg
gtgatttccgggctgaaaaactattaccaatatgcttacgacgctgccagcaatacgttg
cgccccatgtggaatgacggtcaggacatgaccggttatcgtttcaaacgcgatggttac
tacggaaaagcagggacagaacttaagccctttccactagaaggtgattacttattgcca
ctggtgcgtgcttaccgactgagtggtgatgtggaattgtacacactgatcaccaccatg
ctggagcgtctgggaaaagacggattaagtacagttgcaaccccatttctactgcttgcc
atgatagaactggctgaatatcagcaatcaaaaaaatgggctgatcatgcctgggcactg
gcagaaatattatttgcacgtcattttcatcatggtctgttaacccgttcagaaaagcat
cgttatgttcgtctggatgaccccttccctttaattttgctggcgctggttgccgcctgt
aaaaacaagctgaacaaatgcccgcccatattgacacaggggggatatgtacacggagac
tttcgcattaatggggaaaatagggtcatctatgacatagagtttatttatcctgaatta
ttaacacattaa
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