Prodigiosinella aquatilis: PCO85_12355
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Entry
PCO85_12355 CDS
T09220
Name
(GenBank) L,D-transpeptidase family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
prod
Prodigiosinella aquatilis
Pathway
prod01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
PCO85_12355
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prod01002
]
PCO85_12355
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prod01011
]
PCO85_12355
Peptidases and inhibitors [BR:
prod01002
]
Cysteine peptidases
Family C82
PCO85_12355
Peptidoglycan biosynthesis and degradation proteins [BR:
prod01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PCO85_12355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
WJV52050
LinkDB
All DBs
Position
complement(2653496..2654494)
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AA seq
332 aa
AA seq
DB search
MKHAFKLLTLFFVSSLVGISVAWATEYPLPPPGSRLIGENIIYTVPNDGRPLEAIAADYK
IGLLGMLEANPGTDPYLPKAGTTLIIPTQMLLPDAPREGIIINLAELRLYYYPKGKDTVI
VYPIGIGQLGRSTPVMVTRIREKHENPTWTPTPNIRKRYKEDGIILPAVVPAGPDNPMGL
FALRLAKSGGVYLIHGTNANFGIGMRVSSGCIRLRPDDIKALFNAVPVGTQVRVINEPIK
VAVEPDGKRYMEVHQPLSRSDKDDPQTMPIALSKDVKTFIRNKDTDAGSVSATIARRSGM
PVLVNVGQQIHDFQLPQTTGAAAPISAISPSR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacgcttttaaattattaactctattctttgtgtcgtccctggtgggtatctca
gtggcgtgggcgacagaatatccacttccaccaccaggaagccgtttgattggcgaaaat
attatttataccgtacccaacgatggccgccctctggaagcaattgctgctgattataag
attgggttgcttgggatgttggaggcgaatccgggaacggacccttatttgccgaaggcg
ggaaccacattgataattccgacacagatgctgctgccggacgcgccgcgtgaaggtatc
attatcaatctggctgagctgcgcttgtactattatcccaagggcaaggatacggtaatt
gtttatcctatcggcattggtcagttagggcgaagtaccccagttatggtcacccggatc
agagaaaaacatgagaatcctacttggacaccaacgccgaacattcgtaagcgctataaa
gaagatggcatcattttaccggcagtagtcccagctggtccggacaatccgatgggatta
tttgccttacggttggctaaaagtggcggggtttatcttatccatggaaccaatgccaat
tttggcattggtatgcgtgtcagttctggttgtatccgtttacgtcctgatgatatcaag
gcattgtttaatgctgtaccagtaggaactcaggtgcgggttatcaacgaacctatcaag
gtggcggtagaaccggatggtaagcgctatatggaggtacatcagccactgtccagatcg
gataaagatgacccacaaaccatgccgattgctcttagcaaggacgtgaagacgtttatt
cgcaacaaggataccgatgcaggcagtgtctctgccacgattgctcgtcgttctggtatg
cccgtattggttaatgttggacagcagattcacgactttcagttaccgcagacgacaggc
gctgctgcacctatttctgccatcagtccatcacggtaa
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