Prodigiosinella aquatilis: PCO85_15300
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Entry
PCO85_15300 CDS
T09220
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
prod
Prodigiosinella aquatilis
Brite
KEGG Orthology (KO) [BR:
prod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prod03009
]
PCO85_15300 (dbpA)
Enzymes [BR:
prod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PCO85_15300 (dbpA)
Ribosome biogenesis [BR:
prod03009
]
Prokaryotic type
rRNA helicases
PCO85_15300 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Ebola-like_HR1-HR2
DUF1529
CMS1
Motif
Other DBs
NCBI-ProteinID:
WJV52587
LinkDB
All DBs
Position
complement(3304420..3305799)
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AA seq
459 aa
AA seq
DB search
MISTDFSSLPLPASQLSNLQELGYAAMTPVQAAALPAILRGEDVRAKAKTGSGKTAAFGI
GLLNTIETSSFTTQSLVLCPTRELADQVSKALRRLARFTQNIKILTLCGGQPMGPQLDSL
VHAPHIVVGTPGRVQEHLRKGSLSLAAMKILVLDEADRMLDMGFTEAIDNVISHTPSQRQ
TLLFSATYPAEIARISARVQRQPVSIEVDEEHDDTAIEQHFYETSRERRLPLLVALLSQH
QPASCVVFCNTKRECQSVFDALAAQDISVLALHGDMEQRDRDQVLVRFSNHSCRVLVATD
VAARGLDIKQLELVVNFELAFDPEVHVHRIGRTGRAGMQGLAISLCTPEEMNRVHLLEDY
LGITVNWHQAASVGGGVVALEPEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAAEVGKI
DLFPVHAYVAIRKSSAKRALQQLQQGKIKGKNCKVRLLH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgatttccaccgatttttcttctctcccacttcccgcgtcacaattatccaatttgcag
gaactggggtatgccgcgatgacacccgtgcaagcggctgcgttacccgccattctgcgc
ggtgaagatgtgcgggccaaagccaaaaccggcagtggtaaaacggccgcttttggtatt
ggtctactgaacaccattgagacaagttcatttaccactcagtcgttggtgttatgccct
acacgagagttggccgatcaggtaagcaaagcgctgcgtcgactggcgcggtttacccaa
aatattaaaatcctgaccctctgtggtgggcagccgatggggccacaactggattcgctg
gttcatgctcctcacatcgtggtgggaacaccgggacgggttcaggagcatctgcgcaaa
ggatcattgtctttggccgcgatgaaaattctggtactggatgaagccgatcgtatgctg
gatatggggtttaccgaggcgattgataatgtgatcagccatactccatctcagcgacag
acattgttgttttccgctacgtatccggcggaaattgcgcgtatcagcgcccgggtacag
cgtcagccagtcagtatcgaagttgatgaagaacacgatgataccgctattgagcagcat
ttttacgagacatcccgtgaacgtcggcttccactgctggttgcgctattgagccagcat
cagccggcctcctgcgtggtgttttgcaataccaagcgtgagtgtcagagcgtgttcgac
gcgctggccgcacaggatatcagtgtgctggcactgcatggcgatatggagcagcgggat
cgcgatcaggtattggtccgtttttccaatcacagctgtcgcgtgctggtagcaacggat
gtggccgcacgggggctggatatcaagcaactggaactggtggtgaatttcgaactggcg
tttgatcctgaagtgcatgtgcatcgtatcggacgtaccgggcgggcgggtatgcaaggg
ctggcgatcagcctgtgtacgccggaagagatgaatcgtgttcatctgctggaagattat
ctcggtattaccgtgaactggcaccaggcagcgtcggtaggtggtggcgtggtggcactg
gagccggaaatggtcacgctgtgcattgacggaggacgtaaggctaaaatccgtccgggc
gatattcttggtgccctgacaggggacgctggtttaaccgcagcggaggtgggtaaaatc
gatctgtttccggttcatgcttacgtggctattcgtaaaagcagtgccaagcgtgctttg
caacagcttcaacaagggaaaatcaagggaaaaaactgcaaagttcggttgttacattaa
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